Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq75 102 7e-17 >seq75 Length=1151455 Score = 102 bits (112), Expect = 7e-17 Identities = 169/234 (72%), Gaps = 14/234 (6%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || ||||| || ||||| ||||| || ||||||||||| |||||||| ||||||| Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAG-A 638769 Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || || | || || ||||||||||| | | || | |||||||||||| || Sbjct 638770 AAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGG 638829 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG----CTATGGTATCGGTAGACT 48674 | | |||||| || |||| ||||| | ||| | || || |||| || || Sbjct 638830 AATCCCTTCCTTATCTTGGATTT--TGCTT--TTTACGTTATCAATTGTGTCGG-AG-CT 638883 Query 48675 C-CGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || | || | ||| || ||||| ||||| ||||||||||| || |||||||| Sbjct 638884 CTCGACTTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250645528108