Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq75 104 2e-17 seq103 84.2 2e-11 >seq75 Length=1151455 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||||| ||||||||| || | ||| ||||| || | ||||||||| Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| || ||||| || || ||||||| | | ||||||||||| ||| Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| || || | ||||| || ||| | | ||||| | | ||||| Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACT 638890 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| ||||| || || ||||||||||| ||||||||||| Sbjct 638891 TCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTC 94868 || ||||| ||||| | || || || | | |||||| | ||||| |||||||||| Sbjct 638969 GTGGATTCTTTTTGGATATTGTAGTC--TGAGAGTGTTCGGCCGTCCTCAAGCTGTTTTC 639026 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || | ||||| | || |||||| ||||| || ||||||||||| || | |||||| | Sbjct 639027 CGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTGCTTT 639086 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | ||| | | | || || | | ||||| |||| || || ||||| || || || | Sbjct 639087 TAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCGGTCAGGG 639146 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || || ||||||||||| Sbjct 639147 TCTTAACGAAGATCTGCAT 639165 >seq103 Length=249856 Score = 84.2 bits (92), Expect = 2e-11 Identities = 131/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877 |||| || | |||||||||||| | || | ||||| ||||| || ||| | |||| Sbjct 43197 CCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 43256 Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937 | |||| ||||| || || || || || || ||||| | ||||| |||||| | Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316 Query 94938 CGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995 ||| |||||| || ||| ||||| |||| |||||||| || || || || || || || Sbjct 43317 CGATAGTGTC-GC-TGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 43374 Query 94996 AAAG 94999 ||| Sbjct 43375 GAAG 43378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290594806880