Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq75 104 2e-17
seq103 84.2 2e-11
>seq75
Length=1151455
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || | ||||| ||||||||| || | ||| ||||| || | |||||||||
Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | ||| || ||||| || || ||||||| | | ||||||||||| |||
Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| || || | ||||| || ||| | | ||||| | | |||||
Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACT 638890
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| ||||| || || ||||||||||| |||||||||||
Sbjct 638891 TCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTC 94868
|| ||||| ||||| | || || || | | |||||| | ||||| ||||||||||
Sbjct 638969 GTGGATTCTTTTTGGATATTGTAGTC--TGAGAGTGTTCGGCCGTCCTCAAGCTGTTTTC 639026
Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928
|| | ||||| | || |||||| ||||| || ||||||||||| || | |||||| |
Sbjct 639027 CGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTGCTTT 639086
Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988
| ||| | | | || || | | ||||| |||| || || ||||| || || || |
Sbjct 639087 TAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCGGTCAGGG 639146
Query 94989 TTTTCACAAAGATCTGCAT 95007
| || || |||||||||||
Sbjct 639147 TCTTAACGAAGATCTGCAT 639165
>seq103
Length=249856
Score = 84.2 bits (92), Expect = 2e-11
Identities = 131/184 (71%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877
|||| || | |||||||||||| | || | ||||| ||||| || ||| | ||||
Sbjct 43197 CCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 43256
Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937
| |||| ||||| || || || || || || ||||| | ||||| |||||| |
Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316
Query 94938 CGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995
||| |||||| || ||| ||||| |||| |||||||| || || || || || || ||
Sbjct 43317 CGATAGTGTC-GC-TGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 43374
Query 94996 AAAG 94999
|||
Sbjct 43375 GAAG 43378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290594806880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |