Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq49 170 3e-38
seq51 93.3 7e-15
>seq49
Length=1984306
Score = 170 bits (188), Expect = 3e-38
Identities = 190/251 (76%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||| ||||||| ||| ||| ||||| |||||||| || ||||||||||| || ||
Sbjct 533149 GCTAAGCGCCATCGCAAGAT-TCTACGAGACAACATCCAGGGTATCACCAAGCCCGCCAT 533207
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| ||||| |||||||| ||||||||| |||| | || |||| |||||||
Sbjct 533208 CCGTCGTCTTGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGAC 533267
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||||| ||| | |||| ||||||| | || || | |||||| || || || ||
Sbjct 533268 TCGTGGTGTCCTCAAGACCTTCCTCGAAGGTGTCATTCGCGATGCTGTCACATACACTGA 533327
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || || || ||||| | || ||||| | || | |||||
Sbjct 533328 GCACGCCAAGAGAAAGACAGTTACATCGCTGGATGTTGTGTATGCCCTTAAGAGACAAGG 533387
Query 16672 CCGTAAGATTT 16682
||| || |||
Sbjct 533388 ACGTGAGTTTT 533398
>seq51
Length=898200
Score = 93.3 bits (102), Expect = 7e-15
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| || || || |||| | || || ||||||||||| || ||||| ||||| || ||
Sbjct 344257 CGCAAAACGCCACCGCAAAATCCTCCGCGATAACATCCAGGGCATCACTAAGCCTGCCAT 344316
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||||||||||| || ||||| || ||||||||| ||||||
Sbjct 344317 CCGTCGTCTGGCGCGCCGTGGCGGTGTCAAGCGTATCTCTG 344357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075101254844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |