Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq49 170 3e-38 seq51 93.3 7e-15 >seq49 Length=1984306 Score = 170 bits (188), Expect = 3e-38 Identities = 190/251 (76%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| ||||||| ||| ||| ||||| |||||||| || ||||||||||| || || Sbjct 533149 GCTAAGCGCCATCGCAAGAT-TCTACGAGACAACATCCAGGGTATCACCAAGCCCGCCAT 533207 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||| |||||||| ||||||||| |||| | || |||| ||||||| Sbjct 533208 CCGTCGTCTTGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGAC 533267 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | |||| ||||||| | || || | |||||| || || || || Sbjct 533268 TCGTGGTGTCCTCAAGACCTTCCTCGAAGGTGTCATTCGCGATGCTGTCACATACACTGA 533327 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || || || ||||| | || ||||| | || | ||||| Sbjct 533328 GCACGCCAAGAGAAAGACAGTTACATCGCTGGATGTTGTGTATGCCCTTAAGAGACAAGG 533387 Query 16672 CCGTAAGATTT 16682 ||| || ||| Sbjct 533388 ACGTGAGTTTT 533398 >seq51 Length=898200 Score = 93.3 bits (102), Expect = 7e-15 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || || || |||| | || || ||||||||||| || ||||| ||||| || || Sbjct 344257 CGCAAAACGCCACCGCAAAATCCTCCGCGATAACATCCAGGGCATCACTAAGCCTGCCAT 344316 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||||||| || ||||| || ||||||||| |||||| Sbjct 344317 CCGTCGTCTGGCGCGCCGTGGCGGTGTCAAGCGTATCTCTG 344357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075101254844