Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq79 235 7e-57
>seq79
Length=405269
Score = 235 bits (260), Expect = 7e-57
Identities = 588/893 (66%), Gaps = 0/893 (0%)
Strand=Plus/Plus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
|| |||||||| || | |||| |||| || || ||||| || || | | | |
Sbjct 293930 TCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTC 293989
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
|| || || | | || || ||||||||||| ||||| || |||| ||||| | ||
Sbjct 293990 CATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAG 294049
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
||||| | | | | |||||| ||||| ||||| ||| || | ||| | |
Sbjct 294050 AGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAG 294109
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
||||| | |||||||| || | ||| || || | | |||| ||||| ||||| ||||||
Sbjct 294110 ATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCC 294169
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
|| || | |||||||| ||||| || |||||| || ||| |||| || ||||| ||
Sbjct 294170 TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAG 294229
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497
||||| || |||| || || ||| || ||||||| ||| || ||
Sbjct 294230 GAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCA 294289
Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557
|| || || || | || || || || || || || |||||||| || ||||||||
Sbjct 294290 ATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCG 294349
Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63617
|| || || || |||||| | || || || || ||| || | | || ||
Sbjct 294350 ATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCA 294409
Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677
||||| || | |||||||||||| ||||| || |||||| ||| | || || || ||
Sbjct 294410 GCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTT 294469
Query 63678 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63737
|| || || |||| ||| | |||||||| || || |||||||| | ||||||
Sbjct 294470 TCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGT 294529
Query 63738 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63797
|| || | |||| | | ||| ||| ||| | ||| || || |||||||| ||
Sbjct 294530 TGGGGGCGTTCAGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTG 294589
Query 63798 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 63857
|| || || || | ||| ||||| || || || | ||| | || || | || |||
Sbjct 294590 AATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGCAGAATTAAATTCATCT 294649
Query 63858 TTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTT 63917
|| | | ||| | || ||| || || ||||| | | || |||
Sbjct 294650 GCATGTCGCATCACTGTTTCGTACGTGCCCTGCGATATCATCGGGGCAGGTCGTTGATTC 294709
Query 63918 TTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCC 63977
|| || |||| ||| | | | | || || ||||| | || |||| || |||| |
Sbjct 294710 TTCGGGTTAATATAATGGTACAGGTCATCTATCACGGAAGAGAACTGTTTCTTAGTTTGC 294769
Query 63978 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030
||||| ||||| ||||| ||||| | ||| ||||| |||||||| || |||||
Sbjct 294770 TTGTGGAGATTGGATACAGCTATCCGGGCAGCTAGGATGGCATAGTCTGGATG 294822
Score = 100 bits (110), Expect = 4e-16
Identities = 136/187 (73%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT-TAGCATCCGCATATTGTATTA 62946
||| |||| ||| ||||| |||||||| || || |||| | || | ||||| || |
Sbjct 293616 CAAAGCAATAGACGCCAGGTTACAAACTGCAACTTCATCTGGCGAGCA-ATATTCGATGA 293674
Query 62947 TCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGT 63006
|||||||||| || ||| | | || || || | || | |||||| ||||| ||||
Sbjct 293675 TCTCAGTGCATAGGTTAGAGCTTCTAATTGTGCCGAGGTTCTTTTGATTGCTCTTCTTGT 293734
Query 63007 TACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 63066
| ||||| ||||| ||||| || ||||| ||||||| ||| | |||| ||| | ||| |
Sbjct 293735 TGCACGCGTCCTTGTAAAGCATAAATGGGTTACCAGTCTCAGTTTGAGCTTCAAGAATAG 293794
Query 63067 CTTTCCA 63073
| | |||
Sbjct 293795 CATACCA 293801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946359021280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |