Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq73 127 2e-24
seq103 123 2e-23
seq49 107 2e-18
seq75 100 3e-16
>seq73
Length=4627324
Score = 127 bits (140), Expect = 2e-24
Identities = 342/515 (66%), Gaps = 15/515 (3%)
Strand=Plus/Plus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATC-AACAGCAGCACCGCGAC 46145
|| ||| | |||||||| | || ||||| || ||||||| || | || | | |
Sbjct 220799 CCCTGCATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTCCACC 220858
Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205
||| || ||||| | || ||||| || || || ||| |||| || ||| ||
Sbjct 220859 TTT-GCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTT 220917
Query 46206 TGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265
|| | ||||| | | || | |||| ||||||| ||||| |||||| |||||
Sbjct 220918 CGCTTCGATCTTCTGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGA 220977
Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTA-TAACACTC 46324
||| || || || ||||||||| | || || || || || |||||| || | ||||
Sbjct 220978 GCTTATTTCTCGTGACGAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTCTCACTT 221037
Query 46325 GCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCA 46384
|||| || | | || | || | || ||| || ||| || || || | |
Sbjct 221038 GCGTCACCGTC---CCAGC-CAAGAGGCTGTCGAGAGGATCATCACTGAAGCTGTCACTA 221093
Query 46385 TTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGT 46444
| ||| ||||||| || | | || || || | || || || || |||||||| ||
Sbjct 221094 TCGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCGCTTCTTGGAATGAACGCCAAGC 221153
Query 46445 CAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTT----CACCAG 46500
|||||| | ||||| ||||| || || || || || ||||| |||| || ||
Sbjct 221154 TCATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTCCTCGTT--GCTTTGGGCAACAA 221211
Query 46501 CCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560
||| | | || | ||| |||||||| || ||| ||||||||||||||| |||
Sbjct 221212 --GAAAGTCTATAACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGC 221269
Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || || ||||||||||| |||||||| ||
Sbjct 221270 AAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTA 221304
>seq103
Length=249856
Score = 123 bits (136), Expect = 2e-23
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| |||||||| |||||||| | || || |||||| ||||||||||| ||| |||
Sbjct 43197 CCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 43256
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || ||||||||||| || ||||| || || ||||| |||||| ||||| | |
Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | ||| ||| ||||||||| || | ||| | ||| || || ||||| || || ||||
Sbjct 43317 CGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 43376
Query 131225 A 131225
|
Sbjct 43377 A 43377
>seq49
Length=1984306
Score = 107 bits (118), Expect = 2e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| || | || | ||||||||| |||||||||||||| |||
Sbjct 95357 CCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAA 95416
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| ||||| ||||| ||| |||| | || |||||||| || |||
Sbjct 95417 AGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGG 95476
Query 131128 ATTCCTTCTTTGTCGGT 131144
||||| |||||||| ||
Sbjct 95477 ATTCCCTCTTTGTCTGT 95493
>seq75
Length=1151455
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| ||||| | || ||| ||||| | || |||||| |||||||| |||||
Sbjct 638710 GCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGA 638769
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || || ||||||||||| || || |||| | ||||||||| || || ||
Sbjct 638770 AAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGG 638829
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| || || |||||| || | | || | || |||| | |||||
Sbjct 638830 AATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGAC 638889
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||||| ||||| |||||||| ||||| ||||||||
Sbjct 638890 TTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012162782720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |