Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq73 120 3e-22 >seq73 Length=4627324 Score = 120 bits (132), Expect = 3e-22 Identities = 200/287 (70%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || ||||| ||||| | || || || | ||||| || | ||| ||||| || ||| Sbjct 220692 ATATATGTGTCGATGAGGAGGGAGTAGGTCTCAGAGTGAATATTTTCCATCATGATCTGG 220633 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| || | ||| || | | ||| |||||| || | ||| || || Sbjct 220632 AAGCCGTAGAAGCAGCGAGCCTCGGGAACCTGAACTTCTCCGCTGAAACGCTCGACCAGG 220573 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 ||||| ||||| || ||||| || || || || || ||||| | || || || | Sbjct 220572 TTTTCGTTGACGATGCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATGAAGTAC 220513 Query 93542 TTCTCATCATCTTT-AAGCT--TATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||| ||||| || || || | | ||| ||| || |||||||| ||||| | |||| Sbjct 220512 CGCTCGTCATCATTCAATCTGTTGTTCCAGTCGTGAAGGTCTTTTGAGAGATCAATTTCT 220453 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 || | ||||| ||||| || ||||||||||||||||| | ||| || Sbjct 220452 TCTGCGGTCCAGAACGACGCCTCTGCTTTTTTGTACATTTGCCAAAT 220406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860048237920