Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq75 143 2e-29 seq49 105 6e-18 seq103 89.7 4e-13 >seq75 Length=1151455 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | ||||| |||||| | ||||||||||| |||| | | Sbjct 639165 ATGCAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAAAGCTCA 639106 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | ||| ||||||||||| || || ||||| ||||| || || Sbjct 639105 GATACCATTGACAACGTTAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAG 639046 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || ||||| |||||| | ||||| ||| || |||| || ||||| Sbjct 639045 CAACGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTACAAT 638986 Query 22399 ATTCAAAAAGAATCCAC 22415 || |||||||||||||| Sbjct 638985 ATCCAAAAAGAATCCAC 638969 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || ||||| | || || || || | || | || |||||| | | |||||| | ||| Sbjct 639381 GTCAAAACCCTCACTGGCAAGACTATTACCTTGGAGGTGGAATCTTCGGATACCATCGAC 639322 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 | | || ||||| || || || || || || || || || || |||||| | || Sbjct 639321 AACGTAAAGAGCAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCAGCAACGTTTGATC 639262 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || || || || ||| | || ||| ||| ||| | |||||||| ||||| ||||||||| Sbjct 639261 TTCGCTGGAAAGCAGCTCGAAGATGGCCGTACCTTGTCCGATTATAACATCCAAAAAGAA 639202 Query 22411 TCCACCATACAT 22422 |||||| | ||| Sbjct 639201 TCCACCCTCCAT 639190 >seq49 Length=1984306 Score = 105 bits (116), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||| ||||| || || ||||| || ||||| || || || |||||||||||| | || Sbjct 95491 AGACAAAGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAACAGCTCGA 95432 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 |||| ||| ||| | ||||| ||||||||||||||||| || ||| | || | || | Sbjct 95431 GGATGGCCGTACCCTTTCCGACTACAACATTCAAAAAGAGTCGACCCTTCACCTCGTCCT 95372 Query 22431 GCGATTGCGCGGAGGT 22446 ||| |||| || ||| Sbjct 95371 GCGTCTGCGTGGTGGT 95356 >seq103 Length=249856 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || || || || |||| || || || |||| ||||| || || ||| ||| || | Sbjct 43377 TTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACTATC 43318 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| ||||| || ||||||||||| || |||||||| || || || | Sbjct 43317 GACAATGTCAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCCGACCAGCAGCGATTG 43258 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || |||||||| ||| | ||||| ||| || | |||||| |||||||| || Sbjct 43257 ATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGCGATTATAACATTCAGAA 43199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727447533020