Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq75 154 3e-32 seq103 129 1e-24 seq49 91.5 3e-13 >seq75 Length=1151455 Score = 154 bits (170), Expect = 3e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || ||||| ||||||||||| || || || ||| Sbjct 638939 CCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAG 638998 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || || || | ||| || |||||||| ||||||| ||| ||||| ||||| Sbjct 638999 AGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGG 639058 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 || ||||| || |||||||| ||||| || ||| || ||||| |||| ||| || Sbjct 639059 ATACCTTCTTTATCTTGAAT-TTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGAC 639117 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| | || || ||||| || || |||||||| ||||| ||||||||| Sbjct 639118 TTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 152 bits (168), Expect = 9e-32 Identities = 175/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || ||||| | || | || || ||||| |||||||||||||||||||||| Sbjct 639165 TTCCACCACGGAGGCGAAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGG 639224 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | || | |||||||| | |||||| || ||||| || | | ||| ||||| || | Sbjct 639225 ACAAGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGG 639284 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 | |||||||| || || || || ||||| ||| ||| |||||||| || | ||||| Sbjct 639285 GGATGCCTTCTTTATCCTGGAT-TTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCC 639343 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || |||||||| || || || || |||||||| ||||||| | | | || ||| Sbjct 639344 ACCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTTGACGACTGTGTTCAATAT 639396 Score = 131 bits (144), Expect = 3e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || || ||| ||| || || ||||||||||| || || |||| ||||| Sbjct 638725 CAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATC 638784 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| || || || ||||| | || || || |||||||| |||||||| || Sbjct 638785 TTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATC 638844 Query 68369 TTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427 ||| || ||||| || ||| || || ||||| | || ||||| | ||||| | Sbjct 638845 TTGGAT-TTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAG 638903 Query 68428 TTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || ||||| |||||||| Sbjct 638904 TTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 131 bits (144), Expect = 3e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| || || || | |||||||| || || ||||| || |||||||| || || | Sbjct 639480 TTCCTCCACGGAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTG 639539 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | || ||||| | ||||| || ||||| || || | ||| ||||| || | Sbjct 639540 ACAGGGTACGGCCGTCTTCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAG 639599 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || ||||||||||| || || || | |||||| || ||||| || || |||| || | Sbjct 639600 GGATACCTTCCTTGTCCTGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTCAA 639659 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGT 68437 | || | |||||||| ||||| || Sbjct 639660 CGTCGAGAGTGATGGTCTTTCCGGT 639684 >seq103 Length=249856 Score = 129 bits (142), Expect = 1e-24 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || |||||||||||| || |||| || || || | |||||| |||||||| || Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 43258 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || || ||||||||||| ||||| |||||||| || || || |||||| ||| Sbjct 43259 AATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTCG 43318 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| ||| || || || || | ||||||||| || ||||| |||||||||||||| Sbjct 43319 ATAGTGTC-GCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 43377 >seq49 Length=1984306 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || || ||||||||||| ||||| || ||||| Sbjct 95357 CCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAA 95416 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||| || |||||||| || || | ||| |||||||| || Sbjct 95417 AGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGG 95476 Query 68355 ATGCCTTCCTTGTCT 68369 || || || |||||| Sbjct 95477 ATTCCCTCTTTGTCT 95491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621155809760