Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq75 154 3e-32
seq103 129 1e-24
seq49 91.5 3e-13
>seq75
Length=1151455
Score = 154 bits (170), Expect = 3e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | ||| || ||||| ||||||||||| || || || |||
Sbjct 638939 CCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAG 638998
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | || || || | ||| || |||||||| ||||||| ||| ||||| |||||
Sbjct 638999 AGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGG 639058
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|| ||||| || |||||||| ||||| || ||| || ||||| |||| ||| ||
Sbjct 639059 ATACCTTCTTTATCTTGAAT-TTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGAC 639117
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| | || || ||||| || || |||||||| ||||| |||||||||
Sbjct 639118 TTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166
Score = 152 bits (168), Expect = 9e-32
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || || ||||| | || | || || ||||| ||||||||||||||||||||||
Sbjct 639165 TTCCACCACGGAGGCGAAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGG 639224
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| | || | |||||||| | |||||| || ||||| || | | ||| ||||| || |
Sbjct 639225 ACAAGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGG 639284
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411
| |||||||| || || || || ||||| ||| ||| |||||||| || | |||||
Sbjct 639285 GGATGCCTTCTTTATCCTGGAT-TTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCC 639343
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464
|| |||||||| || || || || |||||||| ||||||| | | | || |||
Sbjct 639344 ACCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTTGACGACTGTGTTCAATAT 639396
Score = 131 bits (144), Expect = 3e-25
Identities = 159/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || || ||| ||| || || ||||||||||| || || |||| |||||
Sbjct 638725 CAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATC 638784
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| |||||| || || || ||||| | || || || |||||||| |||||||| ||
Sbjct 638785 TTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATC 638844
Query 68369 TTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGG 68427
||| || ||||| || ||| || || ||||| | || ||||| | ||||| |
Sbjct 638845 TTGGAT-TTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAG 638903
Query 68428 TTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || || || || ||||| ||||||||
Sbjct 638904 TTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
Score = 131 bits (144), Expect = 3e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| || || || | |||||||| || || ||||| || |||||||| || || |
Sbjct 639480 TTCCTCCACGGAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTG 639539
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | || ||||| | ||||| || ||||| || || | ||| ||||| || |
Sbjct 639540 ACAGGGTACGGCCGTCTTCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAG 639599
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || ||||||||||| || || || | |||||| || ||||| || || |||| || |
Sbjct 639600 GGATACCTTCCTTGTCCTGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTCAA 639659
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGT 68437
| || | |||||||| ||||| ||
Sbjct 639660 CGTCGAGAGTGATGGTCTTTCCGGT 639684
>seq103
Length=249856
Score = 129 bits (142), Expect = 1e-24
Identities = 138/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| || |||||||||||| || |||| || || || | |||||| |||||||| ||
Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 43258
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || || ||||||||||| ||||| |||||||| || || || |||||| |||
Sbjct 43259 AATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTCG 43318
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| ||||| ||| || || || || | ||||||||| || ||||| ||||||||||||||
Sbjct 43319 ATAGTGTC-GCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 43377
>seq49
Length=1984306
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| || | ||| || || ||||||||||| ||||| || |||||
Sbjct 95357 CCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAA 95416
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||| || |||||||| || || | ||| |||||||| ||
Sbjct 95417 AGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGG 95476
Query 68355 ATGCCTTCCTTGTCT 68369
|| || || ||||||
Sbjct 95477 ATTCCCTCTTTGTCT 95491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621155809760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |