Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq73 159 7e-34
seq79 116 7e-21
>seq73
Length=4627324
Score = 159 bits (176), Expect = 7e-34
Identities = 348/515 (68%), Gaps = 7/515 (1%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692
||||||||| |||||||| || ||||| || |||||||| | || | ||
Sbjct 220799 CCCTGCATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTCCACC 220858
Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752
|| | || | || || ||||| | |||||||| |||||||||||| || |||||
Sbjct 220859 TTTGCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTC 220918
Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGA 42811
|| || ||||||||| | ||| | | || | | ||||| || || || || || |||||
Sbjct 220919 GCTTCGATCTTCTGGTTGAAG-AAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGA 220977
Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871
|| || | |||||||| | || | || || ||||| ||||| ||||| ||
Sbjct 220978 GCTTATTTCTCGTGACGAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTC---TCA 221034
Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931
| | | ||| ||| | ||| ||| | |||||||| || || || ||
Sbjct 221035 CTTGCGTCACCGTCCCAGCCAAGAGGCTGTCGAGAGGATCATCACTGAAGCTGTCACTAT 221094
Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991
|||| |||||||||| | | | || || || | || | || |||||| | | ||
Sbjct 221095 CGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCGCTTCTTGGAATGAACGCCAAGCT 221154
Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCC 43050
||||||| | ||||| ||| |||||| || | ||||| || | |||| ||
Sbjct 221155 CATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTCCTCGTTGC-TTTGGGCAACAAGA 221213
Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110
|||| ||| | | ||| || ||||| ||||| |||||||| ||| |||||||
Sbjct 221214 AAGTCTATAACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGCAAGA 221273
Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
||||||| ||||| ||||| |||| ||||||||||
Sbjct 221274 CCAACTTCTTCGAAAAGCGTGTCGGCGACTACCAG 221308
>seq79
Length=405269
Score = 116 bits (128), Expect = 7e-21
Identities = 321/483 (66%), Gaps = 12/483 (2%)
Strand=Plus/Plus
Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC-GGGGCACGACGCCGGGC 244973
||| || ||||| |||||| ||| |||| || | | ||| ||||| | ||||
Sbjct 293920 GTAAAGAGCCTCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTG-GGGC 293978
Query 244974 ACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGA 245033
| | |||| |||| ||||| | || || | | ||| || || ||||| ||||||
Sbjct 293979 AAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGA 294038
Query 245034 GGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCA 245093
| ||| ||||||| || | | || || ||| || |||||| | || ||||
Sbjct 294039 GAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCA 294098
Query 245094 AAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCT 245153
| || || |||| ||| |||||| ||||| | ||| | ||||| || || |||||||
Sbjct 294099 AGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCT 294158
Query 245154 TGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCAC 245211
|||| ||||||||||| | ||| ||| | || | |||||| | ||||| | || ||
Sbjct 294159 TGTTACCTCCCTGGTCGA-CAT-ATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAAC 294216
Query 245212 TATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC---TGAGGTT 245268
|| ||||| ||| ||| || || || ||||| | || |||| | || |||
Sbjct 294217 GATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTG 294276
Query 245269 GCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGT 245328
|| || | ||| | || || || ||| || || | ||| || |||| | ||
Sbjct 294277 AATGTTG---AGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGT 294333
Query 245329 GTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG 245388
||| || ||||| || |||||| |||||||| || || ||||| || | || |||
Sbjct 294334 GTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTG 294393
Query 245389 GGG 245391
||
Sbjct 294394 AGG 294396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337925142080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |