Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq73 159 7e-34 seq79 116 7e-21 >seq73 Length=4627324 Score = 159 bits (176), Expect = 7e-34 Identities = 348/515 (68%), Gaps = 7/515 (1%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 ||||||||| |||||||| || ||||| || |||||||| | || | || Sbjct 220799 CCCTGCATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTCCACC 220858 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 || | || | || || ||||| | |||||||| |||||||||||| || ||||| Sbjct 220859 TTTGCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTC 220918 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGA 42811 || || ||||||||| | ||| | | || | | ||||| || || || || || ||||| Sbjct 220919 GCTTCGATCTTCTGGTTGAAG-AAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGA 220977 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 || || | |||||||| | || | || || ||||| ||||| ||||| || Sbjct 220978 GCTTATTTCTCGTGACGAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTC---TCA 221034 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 | | | ||| ||| | ||| ||| | |||||||| || || || || Sbjct 221035 CTTGCGTCACCGTCCCAGCCAAGAGGCTGTCGAGAGGATCATCACTGAAGCTGTCACTAT 221094 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 |||| |||||||||| | | | || || || | || | || |||||| | | || Sbjct 221095 CGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCGCTTCTTGGAATGAACGCCAAGCT 221154 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCC 43050 ||||||| | ||||| ||| |||||| || | ||||| || | |||| || Sbjct 221155 CATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTCCTCGTTGC-TTTGGGCAACAAGA 221213 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 |||| ||| | | ||| || ||||| ||||| |||||||| ||| ||||||| Sbjct 221214 AAGTCTATAACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGCAAGA 221273 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| ||||| ||||| |||| |||||||||| Sbjct 221274 CCAACTTCTTCGAAAAGCGTGTCGGCGACTACCAG 221308 >seq79 Length=405269 Score = 116 bits (128), Expect = 7e-21 Identities = 321/483 (66%), Gaps = 12/483 (2%) Strand=Plus/Plus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC-GGGGCACGACGCCGGGC 244973 ||| || ||||| |||||| ||| |||| || | | ||| ||||| | |||| Sbjct 293920 GTAAAGAGCCTCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTG-GGGC 293978 Query 244974 ACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGA 245033 | | |||| |||| ||||| | || || | | ||| || || ||||| |||||| Sbjct 293979 AAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGA 294038 Query 245034 GGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCA 245093 | ||| ||||||| || | | || || ||| || |||||| | || |||| Sbjct 294039 GAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCA 294098 Query 245094 AAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCT 245153 | || || |||| ||| |||||| ||||| | ||| | ||||| || || ||||||| Sbjct 294099 AGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCT 294158 Query 245154 TGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCAC 245211 |||| ||||||||||| | ||| ||| | || | |||||| | ||||| | || || Sbjct 294159 TGTTACCTCCCTGGTCGA-CAT-ATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAAC 294216 Query 245212 TATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC---TGAGGTT 245268 || ||||| ||| ||| || || || ||||| | || |||| | || ||| Sbjct 294217 GATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTG 294276 Query 245269 GCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGT 245328 || || | ||| | || || || ||| || || | ||| || |||| | || Sbjct 294277 AATGTTG---AGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGT 294333 Query 245329 GTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG 245388 ||| || ||||| || |||||| |||||||| || || ||||| || | || ||| Sbjct 294334 GTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTG 294393 Query 245389 GGG 245391 || Sbjct 294394 AGG 294396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337925142080