Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq75 147 5e-30 seq103 98.7 2e-15 seq73 95.1 3e-14 >seq75 Length=1151455 Score = 147 bits (162), Expect = 5e-30 Identities = 172/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | ||| ||||||||||||||| ||||| | | Sbjct 638939 CCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAG 638998 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | |||||||| |||||||| || || || || |||| Sbjct 638999 AGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGG 639058 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||||||||| || ||||| ||| ||||| || || | ||| ||| ||| Sbjct 639059 ATACCTTCTTTATCTTGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCT---TTCG 639115 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || || ||||| || |||||||| ||||| ||||| ||||||||| Sbjct 639116 ACTTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 129 bits (142), Expect = 1e-24 Identities = 172/235 (73%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || ||||| | ||| |||||||||||| ||||| |||| Sbjct 639166 TCCACCACGGAGGCGAAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGA 639225 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 | || || || ||||| | || ||||| |||||||||| ||| || || ||| Sbjct 639226 CAAGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTG---GTCTGG 639282 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| |||||||||||||||||||| ||| || ||||| || || | ||| |||| Sbjct 639283 GGGGATGCCTTCTTTATCCTGGATTTT-GCTCTTTACGTTGTCGATGGTATCCGAAGATT 639341 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 | || || | || || ||||| || || || || ||||||| | | | || ||| Sbjct 639342 CCACCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTTGACGACTGTGTTCAATAT 639396 Score = 123 bits (136), Expect = 6e-23 Identities = 168/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || | ||| | || | ||| | ||||| || || || || ||||| || Sbjct 638708 TGGCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCA 638767 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||||| || || ||||||| || || || || ||||| |||||||| ||| | Sbjct 638768 GAAAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGT 638827 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || ||||| ||||| |||||||| ||| ||||| || || | ||| ||| Sbjct 638828 GGAATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTC--- 638884 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| || || ||||||||||| || ||||| |||||||| Sbjct 638885 TCGACTTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || || || |||||||| | ||| || || |||||| Sbjct 639518 TCCTTCTGGATGTTGTAGTCTGACAGGGTACGGCCGTCTTCCAGTTGCTTGCCAGCGAAG 639577 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || || || || | ||||| ||||| || ||||||||||| | || || Sbjct 639578 ATAAGGCGTTGCTGGTCAGGAGGGATACCTTCCTTGTCCTGGATTTTGGACTTGACTGCG 639637 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 || |||| ||| | || || || ||||| ||||| ||||| ||||| Sbjct 639638 TCGATAGTATCACCTGACTCAACGTCGAGAGTGATGGTCTTTCCGGT 639684 >seq103 Length=249856 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 288278 TGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTG 288337 ||| | | || || || ||||| ||| ||||| || ||||| || | || || || | Sbjct 43191 TGCCTACCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGG 43250 Query 288338 CGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCA 288397 ||||||||| ||||| || |||||| || || || ||||||||||| || | Sbjct 43251 CGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGA 43310 Query 288398 CGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 | || || |||| ||||| || || || || || ||||| ||||| || || || |||| Sbjct 43311 CATTGTCGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCT 43370 Query 288458 TGACGAA 288464 ||||||| Sbjct 43371 TGACGAA 43377 >seq73 Length=4627324 Score = 95.1 bits (104), Expect = 3e-14 Identities = 169/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 269098 GAAGCAGTTACAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGT 269157 ||||| || || | ||| | |||||| ||| || ||| |||| | | | || Sbjct 221081 GAAGCTGTCACTATCGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCGCTTCTTGGA 221140 Query 269158 ATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCA 269217 ||||| ||| | |||||| ||||| || || ||||| |||||||| || || || Sbjct 221141 ATGAACGCCAAGCTCATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTCCTCGTTGCT 221200 Query 269218 CTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCG 269277 | || | ||||||| || || || | || || || | ||| ||||| || || Sbjct 221201 TTGGGCAACAAGAAAGTCTATAACTCCACCAACCCATTTGACTTCATGGACAACATCTCC 221260 Query 269278 CTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGTGT 269336 || | || ||||| ||||||||||||||||||||| ||||||| || | | || ||||| Sbjct 221261 CTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTACCAGAAGGCC-GGTGT 221319 Query 269337 AATG 269340 ||| Sbjct 221320 CATG 221323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652767653224