Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq103 122 9e-23 seq75 122 9e-23 >seq103 Length=249856 Score = 122 bits (134), Expect = 9e-23 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| ||||| || ||||| || ||||| |||| || |||||||| || ||||| | Sbjct 43197 CCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 43256 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | | |||||||||||||| ||| | || |||||||||| |||||| |||| | Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | |||||||| || || || || | |||||||| ||||||||||| ||||| || | Sbjct 43317 CGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 43376 Query 42199 AG 42200 || Sbjct 43377 AG 43378 >seq75 Length=1151455 Score = 122 bits (134), Expect = 9e-23 Identities = 171/239 (72%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 ||||| | || || | || | |||||||||||| | ||||||||||| ||||| || Sbjct 638702 ATTTAGTGGCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTA 638761 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 ||||||| || ||||| | || ||||||||||||||||| || ||||| |||||||| Sbjct 638762 TAATCAGAAAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGA 638821 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---G 42149 || | ||| | | ||||| || |||||| ||| | | | | ||||| | Sbjct 638822 TCTGGTGGAATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAG 638881 Query 42150 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || | ||||| |||||||| || || || || || ||||| ||||| Sbjct 638882 CTC---TCGACTTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212066662720