Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq75 114 1e-20 seq49 93.3 4e-14 seq103 84.2 2e-11 >seq75 Length=1151455 Score = 114 bits (126), Expect = 1e-20 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || ||||||||||| || ||||| |||| || || || |||| Sbjct 638953 AAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTC 639012 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||| || ||||| | ||||| || |||||||| || || || |||||||| || Sbjct 639013 CTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATC 639072 Query 64351 TTGTATTTTTTGCTTT--ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||| | ||||||||| || || | ||||| | || ||||| | ||| | Sbjct 639073 TTGAA--TTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATC 639130 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || |||||||||| || || ||||| || |||||| Sbjct 639131 GTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || ||||||||||| ||||| ||||| | | ||| || | || Sbjct 639181 AAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATC 639240 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| |||||||| || || | || | || |||||||| || || || |||||||| || Sbjct 639241 TTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATC 639300 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || ||||| |||||| || | ||||| | ||||| || | || | || Sbjct 639301 CTGGATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGT 639360 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 |||||| || | ||||| |||| Sbjct 639361 CTTGCCAGTGAGGGTTTTGACGA 639383 >seq49 Length=1984306 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || |||| ||||| ||||||||||||||||| || | Sbjct 95356 ACCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGA 95415 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || || ||||| |||||||| | || || || ||||||||||| || Sbjct 95416 AAGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGG 95475 Query 64336 AATTCCTTCTTTTTCT 64351 ||||| ||||| ||| Sbjct 95476 GATTCCCTCTTTGTCT 95491 >seq103 Length=249856 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACG-GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAAT 64314 || |||||||| ||||| || | | || || |||| ||||||||||||||||| | || Sbjct 43199 TTCTGAATGTTATAATC-GCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGAT 43257 Query 64315 GAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTC 64374 | |||||||||||||| || || || || || || || ||||| ||| ||| || Sbjct 43258 CAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTC 43317 Query 64375 CACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 | || || | || || || || | || | ||||||||| || | || || ||||| Sbjct 43318 GATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 43377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644125479520