Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq75 114 1e-20
seq49 93.3 4e-14
seq103 84.2 2e-11
>seq75
Length=1151455
Score = 114 bits (126), Expect = 1e-20
Identities = 156/216 (72%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || ||||||||||| || ||||| |||| || || || ||||
Sbjct 638953 AAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTC 639012
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||| || ||||| | ||||| || |||||||| || || || |||||||| ||
Sbjct 639013 CTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATC 639072
Query 64351 TTGTATTTTTTGCTTT--ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
||| | ||||||||| || || | ||||| | || ||||| | ||| |
Sbjct 639073 TTGAA--TTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATC 639130
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| |||||||||| || || ||||| || ||||||
Sbjct 639131 GTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||| | || ||||||||||| ||||| ||||| | | ||| || | ||
Sbjct 639181 AAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATC 639240
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| |||||||| || || | || | || |||||||| || || || |||||||| ||
Sbjct 639241 TTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATC 639300
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| ||||| |||||| || | ||||| | ||||| || | || | ||
Sbjct 639301 CTGGATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGT 639360
Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433
|||||| || | ||||| ||||
Sbjct 639361 CTTGCCAGTGAGGGTTTTGACGA 639383
>seq49
Length=1984306
Score = 93.3 bits (102), Expect = 4e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || || |||| ||||| ||||||||||||||||| || |
Sbjct 95356 ACCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGA 95415
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || || ||||| |||||||| | || || || ||||||||||| ||
Sbjct 95416 AAGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGG 95475
Query 64336 AATTCCTTCTTTTTCT 64351
||||| ||||| |||
Sbjct 95476 GATTCCCTCTTTGTCT 95491
>seq103
Length=249856
Score = 84.2 bits (92), Expect = 2e-11
Identities = 128/180 (71%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 64256 TTTTGAATGTTGTAATCTGCGACG-GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAAT 64314
|| |||||||| ||||| || | | || || |||| ||||||||||||||||| | ||
Sbjct 43199 TTCTGAATGTTATAATC-GCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGAT 43257
Query 64315 GAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTC 64374
| |||||||||||||| || || || || || || || ||||| ||| ||| ||
Sbjct 43258 CAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTC 43317
Query 64375 CACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
| || || | || || || || | || | ||||||||| || | || || |||||
Sbjct 43318 GATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 43377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644125479520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |