Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq79 183 3e-41
>seq79
Length=405269
Score = 183 bits (202), Expect = 3e-41
Identities = 318/460 (69%), Gaps = 2/460 (0%)
Strand=Plus/Minus
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956
|| ||||| ||||| || || |||||| || |||||| ||||||| ||||| || |||
Sbjct 294426 CCTACCCTTTTCAATGCTGGTACCCCGCAACCTCAGATGGCTTCGTGCTTCCTTATCGAC 294367
Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016
| |||| ||| ||| || |||| ||||| | ||| ||||| || ||
Sbjct 294366 -ATGAAGGAGGACAGTATCGAGGGTATTTACGACACGTTGAAGACTTGTGCCTTGATTTC 294308
Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076
||| || || || || || ||| | ||| | | |||| || ||||| |||||
Sbjct 294307 AAAGACTGCTGGTGGTATTGGCCTCAACATTCACCGCATTCGTGGCACTGGTTCTTACAT 294248
Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136
||| || |||||| |||||||||| |||| || ||||| || || ||||||||| |
Sbjct 294247 TGCCGGAACGAATGGCTCCTCCAACGGAATCGTTCCCATGCTGCGAGTTTTCAACAACAC 294188
Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196
|| | || || |||||||| ||| | | || ||| ||||||| | || || ||
Sbjct 294187 TGCTAGATATGTCGACCAGGGAGGTAACAAGCGGCCGGGAGCTTTCGCTATTTACCTTGA 294128
Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256
||| |||||| | || | | ||| | ||||| || ||||||||||| || ||
Sbjct 294127 GCCGTGGCACACCGATATCTTCGAATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGA 294068
Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316
| |||| | || |||||| ||||||||| || || || ||||||||||| ||
Sbjct 294067 AGTTCGGGCTCGCGATCTCTTCCTGGCTCTCTGGACACCCGATCTGTTTATGAAACGTGT 294008
Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356
|||||||| || |||| ||| ||||| |||||||||
Sbjct 294007 TGAGAAAAATGGCGAATGGACTCTCTTTTGCCCCAATGAA 293968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722532123680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |