Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq73 122 9e-23 seq75 82.4 8e-11 >seq73 Length=4627324 Score = 122 bits (134), Expect = 9e-23 Identities = 345/519 (66%), Gaps = 17/519 (3%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-C 52384 || || ||| | ||||| |||||| | ||||| || ||||||||| || | | | Sbjct 220796 GTTCCCTGCATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGA-AGATAAGGAGTC 220854 Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444 ||| | || |||| | || |||||||| ||||| ||| | || || || Sbjct 220855 CACCTTTGCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATC 220914 Query 52445 CTTTGCCGCCATCTTTTACATTAA--AACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 ||| || | ||||| | | || |||| ||| | ||||| ||||| ||||| Sbjct 220915 CTTCGCTTCGATCTTCTGGTTGAAGAAACGG--GGCCTCATGCCTGGCCTTACGTTTTCT 220972 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG 52562 |||||| | || || || ||||| || | ||||| || || || || ||| || | Sbjct 220973 AACGAGCTTATTTCTCGTGACGAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTCT 221032 Query 52563 -ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGT 52621 || |||| |||| | | || | || ||| || ||| || || || Sbjct 221033 CACTTGCGTCACCGTCCCAGCCAA----GAGGCTGTCGAGAGGATCATCACTGAAGCTGT 221088 Query 52622 GGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGC 52681 ||||||| ||||||| || | | || || ||||||| ||| || || |||||||| Sbjct 221089 CACTATCGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCGCTTCTTGGAATGAACGC 221148 Query 52682 GCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGC 52740 || ||||||| | ||||| ||||| || || ||||| || | || ||| |||| Sbjct 221149 CAAGCTCATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTCCTCGTT--GCTTTGGGC 221206 Query 52741 AGCCA--AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGA 52798 | | | |||| || ||| | ||| || ||||| || ||| ||||||| || || | Sbjct 221207 AACAAGAAAGT-CTATAACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGC 221265 Query 52799 GGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||||||| ||||| ||||| |||||||| || Sbjct 221266 CGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTA 221304 >seq75 Length=1151455 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || ||||| | ||| || ||||| | | |||||| |||||||| || || Sbjct 638710 GCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGA 638769 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || || ||||| | | |||| |||||||| || || || || Sbjct 638770 AAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGG 638829 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || |||||| ||||| | || | ||||||| ||| || Sbjct 638830 AATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGAC 638889 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || ||||||||||| || || |||||||| Sbjct 638890 TTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261730045760