Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq73 122 9e-23
seq75 82.4 8e-11
>seq73
Length=4627324
Score = 122 bits (134), Expect = 9e-23
Identities = 345/519 (66%), Gaps = 17/519 (3%)
Strand=Plus/Plus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-C 52384
|| || ||| | ||||| |||||| | ||||| || ||||||||| || | | |
Sbjct 220796 GTTCCCTGCATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGA-AGATAAGGAGTC 220854
Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444
||| | || |||| | || |||||||| ||||| ||| | || || ||
Sbjct 220855 CACCTTTGCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATC 220914
Query 52445 CTTTGCCGCCATCTTTTACATTAA--AACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502
||| || | ||||| | | || |||| ||| | ||||| ||||| |||||
Sbjct 220915 CTTCGCTTCGATCTTCTGGTTGAAGAAACGG--GGCCTCATGCCTGGCCTTACGTTTTCT 220972
Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG 52562
|||||| | || || || ||||| || | ||||| || || || || ||| || |
Sbjct 220973 AACGAGCTTATTTCTCGTGACGAGGGCTTACACACTGATTTCGCCTGTCTCCTCTTCTCT 221032
Query 52563 -ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGT 52621
|| |||| |||| | | || | || ||| || ||| || || ||
Sbjct 221033 CACTTGCGTCACCGTCCCAGCCAA----GAGGCTGTCGAGAGGATCATCACTGAAGCTGT 221088
Query 52622 GGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGC 52681
||||||| ||||||| || | | || || ||||||| ||| || || ||||||||
Sbjct 221089 CACTATCGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCGCTTCTTGGAATGAACGC 221148
Query 52682 GCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGC 52740
|| ||||||| | ||||| ||||| || || ||||| || | || ||| ||||
Sbjct 221149 CAAGCTCATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTCCTCGTT--GCTTTGGGC 221206
Query 52741 AGCCA--AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGA 52798
| | | |||| || ||| | ||| || ||||| || ||| ||||||| || || |
Sbjct 221207 AACAAGAAAGT-CTATAACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGC 221265
Query 52799 GGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|||||||||||||| ||||| ||||| |||||||| ||
Sbjct 221266 CGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTA 221304
>seq75
Length=1151455
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || ||||| | ||| || ||||| | | |||||| |||||||| || ||
Sbjct 638710 GCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGA 638769
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || || || || || ||||| | | |||| |||||||| || || || ||
Sbjct 638770 AAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGG 638829
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| || || |||||| ||||| | || | ||||||| ||| ||
Sbjct 638830 AATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGAC 638889
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| || ||||||||||| || || ||||||||
Sbjct 638890 TTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261730045760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |