Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq75 129 6e-25 seq103 102 8e-17 >seq75 Length=1151455 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || |||| |||||||||||| | || ||| || ||||| || ||||| Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| |||||||| || ||||| |||| | ||||||||||| || || Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830 Query 127007 ATGCCCTCCTTGTCCGTGATTTT-CTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || |||||| || || ||| || | ||||| | |||||||| Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTT-ATCAATTGTGTCGGAGCTCTCGAC 638889 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | |||||||||||||||||||| || || |||||||| Sbjct 638890 TTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || |||||||| |||||||| || | || || || || ||||||||||| Sbjct 638969 GTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTCCTCAAGCTGTTTTCCG 639028 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT- 127035 ||| |||| | ||| ||||| || || || || || || || | | ||| ||| ||||| Sbjct 639029 GCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTAT-CTTGAATTT-TGCTTT 639086 Query 127036 --GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGA 127093 |||| || | ||| || | || |||||||| | || | ||||||||||||||| Sbjct 639087 TAACGTTG-TCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCGGTCAGG 639145 Query 127094 GTTTTTACAAAAATCTGCAT 127113 || || || || |||||||| Sbjct 639146 GTCTTAACGAAGATCTGCAT 639165 >seq103 Length=249856 Score = 102 bits (112), Expect = 8e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || ||||| || ||||||| | ||| || || || ||||| || || ||| ||||| Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 43258 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 ||||||||||| ||||| || ||||||||||||||| |||||| ||||| | ||| Sbjct 43259 AATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTCG 43318 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | ||||| | |||||| || | ||| | || ||||| || || || || || || Sbjct 43319 ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 43377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500158073920