Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq79 123 3e-23 seq73 116 5e-21 >seq79 Length=405269 Score = 123 bits (136), Expect = 3e-23 Identities = 405/626 (65%), Gaps = 5/626 (1%) Strand=Plus/Plus Query 116657 CGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCC 116715 ||||||| ||| || ||||||||||| || ||| || | || | | ||||| || Sbjct 293910 CGTACTTCTCGTAAAGAGCCTCAAACTCGTC-GCCATAGACATCCGCCAAGCCTGGGGCT 293968 Query 116716 TTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCT 116775 | || || || ||||||| ||||| ||| | |||||| || ||||| || || || Sbjct 293969 TCATTGGGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCG 294028 Query 116776 GGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGA 116835 || ||||||| ||| ||||||||| ||| ||| |||| || | || || || | Sbjct 294029 GGTGTCCAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTA 294088 Query 116836 CGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 116895 || | ||||| || || | |||||| | ||||||||| || ||||| | |||| | Sbjct 294089 CGAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCT 294148 Query 116896 CCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGC 116952 ||| || ||| |||||| ||||| || || || ||| || || || ||| Sbjct 294149 CCCGGCCGCTTGTTACCTCCCTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGC 294208 Query 116953 ATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTG 117012 || |||| ||| || | || |||||| || || ||| ||| || | | Sbjct 294209 ATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGA 294268 Query 117013 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTG 117072 | ||| |||| | |||||||| || || |||||| || || || | | Sbjct 294269 ATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTC 294328 Query 117073 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 117132 | || |||| || || ||||| ||| |||| | |||| |||||||| | | Sbjct 294329 AACGTGTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCC 294388 Query 117133 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 117192 || || || || |||||||| ||||| ||||| || | || || |||| | | Sbjct 294389 ATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTT 294448 Query 117193 TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATT 117252 || ||||| | || || || | ||| | || || |||||||| |||| Sbjct 294449 TGAGACATGAGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACA 294508 Query 117253 GAGACCCGCATAAACATGTATTGGGG 117278 | || ||||| | ||||| |||||| Sbjct 294509 GCAACACGCATGATCATGTGTTGGGG 294534 >seq73 Length=4627324 Score = 116 bits (128), Expect = 5e-21 Identities = 302/453 (67%), Gaps = 8/453 (2%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||| ||||||||||| ||||| || | ||| ||| || ||||| Sbjct 221305 GTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTGTCCAT 221246 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || ||||||||||| | ||||| | | || ||| ||| || | |||||| Sbjct 221245 GAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAAAGCAAC--GAGGAGG 221188 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG-GTT 127407 ||||| | |||| |||||||||| | |||| || | |||||| || | || | Sbjct 221187 CGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAAGCGCG 221128 Query 127408 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGC 127467 || ||||| || || | | |||| ||| ||| || |||||||| | ||| Sbjct 221127 ACC-GGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGATGATCCT 221069 Query 127468 GTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAG-CAAACT 127526 | | || || | || | | || || |||||| |||| | || | Sbjct 221068 CTCGACAGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAG-ACAGGCGAAAT 221010 Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586 | ||| | ||||||||||| || || || || || || || || || ||||||| Sbjct 221009 CAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGCCAGGCATGA 220950 Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646 | ||||| |||||||||||||| |||| | || || ||| ||||||||| || || | Sbjct 220949 GGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGATGCCTTCGA 220890 Query 127647 CACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 | ||||| || | ||||||| ||||||| Sbjct 220889 CGGCAGCGAAGGCGACGAGACGCTGTGCAAAGG 220857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506371765280