Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq79 123 3e-23
seq73 116 5e-21
>seq79
Length=405269
Score = 123 bits (136), Expect = 3e-23
Identities = 405/626 (65%), Gaps = 5/626 (1%)
Strand=Plus/Plus
Query 116657 CGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCC 116715
||||||| ||| || ||||||||||| || ||| || | || | | ||||| ||
Sbjct 293910 CGTACTTCTCGTAAAGAGCCTCAAACTCGTC-GCCATAGACATCCGCCAAGCCTGGGGCT 293968
Query 116716 TTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCT 116775
| || || || ||||||| ||||| ||| | |||||| || ||||| || || ||
Sbjct 293969 TCATTGGGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCG 294028
Query 116776 GGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGA 116835
|| ||||||| ||| ||||||||| ||| ||| |||| || | || || || |
Sbjct 294029 GGTGTCCAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTA 294088
Query 116836 CGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGAC 116895
|| | ||||| || || | |||||| | ||||||||| || ||||| | |||| |
Sbjct 294089 CGAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCT 294148
Query 116896 CCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGC 116952
||| || ||| |||||| ||||| || || || ||| || || || |||
Sbjct 294149 CCCGGCCGCTTGTTACCTCCCTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGC 294208
Query 116953 ATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTG 117012
|| |||| ||| || | || |||||| || || ||| ||| || | |
Sbjct 294209 ATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGA 294268
Query 117013 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTG 117072
| ||| |||| | |||||||| || || |||||| || || || | |
Sbjct 294269 ATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTC 294328
Query 117073 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 117132
| || |||| || || ||||| ||| |||| | |||| |||||||| | |
Sbjct 294329 AACGTGTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCC 294388
Query 117133 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 117192
|| || || || |||||||| ||||| ||||| || | || || |||| | |
Sbjct 294389 ATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTT 294448
Query 117193 TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATT 117252
|| ||||| | || || || | ||| | || || |||||||| ||||
Sbjct 294449 TGAGACATGAGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACA 294508
Query 117253 GAGACCCGCATAAACATGTATTGGGG 117278
| || ||||| | ||||| ||||||
Sbjct 294509 GCAACACGCATGATCATGTGTTGGGG 294534
>seq73
Length=4627324
Score = 116 bits (128), Expect = 5e-21
Identities = 302/453 (67%), Gaps = 8/453 (2%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| ||||| ||||| ||||||||||| ||||| || | ||| ||| || |||||
Sbjct 221305 GTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTGTCCAT 221246
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348
|| ||||||||||| | ||||| | | || ||| ||| || | ||||||
Sbjct 221245 GAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAAAGCAAC--GAGGAGG 221188
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG-GTT 127407
||||| | |||| |||||||||| | |||| || | |||||| || | || |
Sbjct 221187 CGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAAGCGCG 221128
Query 127408 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGC 127467
|| ||||| || || | | |||| ||| ||| || |||||||| | |||
Sbjct 221127 ACC-GGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGATGATCCT 221069
Query 127468 GTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAG-CAAACT 127526
| | || || | || | | || || |||||| |||| | || |
Sbjct 221068 CTCGACAGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAG-ACAGGCGAAAT 221010
Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586
| ||| | ||||||||||| || || || || || || || || || |||||||
Sbjct 221009 CAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGCCAGGCATGA 220950
Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646
| ||||| |||||||||||||| |||| | || || ||| ||||||||| || || |
Sbjct 220949 GGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGATGCCTTCGA 220890
Query 127647 CACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679
| ||||| || | ||||||| |||||||
Sbjct 220889 CGGCAGCGAAGGCGACGAGACGCTGTGCAAAGG 220857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506371765280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |