Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq75 127 5e-24 seq49 87.8 4e-12 >seq75 Length=1151455 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| ||||| || || || ||||||| ||| || || | ||| || | |||||| Sbjct 639182 AGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCT 639241 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| | ||| |||||||| || || |||||| ||| Sbjct 639242 TCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCC 639301 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| ||| |||| ||| || | | ||| || ||||| || || ||| Sbjct 639302 TGGATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTC 639361 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || ||||| ||||| || Sbjct 639362 TTGCCAGTGAGGGTTTTGAC 639381 Score = 107 bits (118), Expect = 5e-18 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||||||||||| || || || ||||||| |||||||| | | || Sbjct 638945 CGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTT 639004 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || ||||| ||||||||||||||||| || |||||||| || || ||| Sbjct 639005 CGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCT 639064 Query 199529 TCTCGCTCCTGAATCTTTTGC--TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 ||| || |||| |||||| || ||| || | ||| |||| |||| || || | Sbjct 639065 TCTTTATCTTGAA--TTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAA 639122 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || || || || || || Sbjct 639123 GAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTG 639162 Score = 95.1 bits (104), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||||| |||||| || | ||| || |||| | |||| || Sbjct 638722 TCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCC 638781 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| |||||||| || || ||||||||||||||||| || || ||| ||||| Sbjct 638782 ATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTT 638841 Query 199534 CTCCTGAATCTTTTGC--TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || | |||||| || ||| || | ||||| | | || || || | ||| Sbjct 638842 ATCTTGGA--TTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTG 638899 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||||||||| || || || Sbjct 638900 ATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTG 638934 >seq49 Length=1984306 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| ||||| || |||||||| ||||| | ||||||||| | | || Sbjct 95363 CGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTA 95422 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| || ||||||||||| || || |||||||| || ||||| Sbjct 95423 CGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCC 95482 Query 199529 TCT 199531 ||| Sbjct 95483 TCT 95485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919968667236