Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq75 127 5e-24
seq49 87.8 4e-12
>seq75
Length=1151455
Score = 127 bits (140), Expect = 5e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||| ||||| || || || ||||||| ||| || || | ||| || | ||||||
Sbjct 639182 AGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCT 639241
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||| |||||||| | ||| |||||||| || || |||||| |||
Sbjct 639242 TCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCC 639301
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||| ||| |||| ||| || | | ||| || ||||| || || |||
Sbjct 639302 TGGATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTC 639361
Query 199598 TTACCCGTGAGAGTTTTCAC 199617
|| || ||||| ||||| ||
Sbjct 639362 TTGCCAGTGAGGGTTTTGAC 639381
Score = 107 bits (118), Expect = 5e-18
Identities = 157/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||||||||||| || || || ||||||| |||||||| | | ||
Sbjct 638945 CGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTT 639004
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || ||||| ||||||||||||||||| || |||||||| || || |||
Sbjct 639005 CGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCT 639064
Query 199529 TCTCGCTCCTGAATCTTTTGC--TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586
||| || |||| |||||| || ||| || | ||| |||| |||| || || |
Sbjct 639065 TCTTTATCTTGAA--TTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAA 639122
Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || || || || || || || || ||
Sbjct 639123 GAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTG 639162
Score = 95.1 bits (104), Expect = 3e-14
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||||| |||||| || | ||| || |||| | |||| ||
Sbjct 638722 TCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCC 638781
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| |||||||| || || ||||||||||||||||| || || ||| |||||
Sbjct 638782 ATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTT 638841
Query 199534 CTCCTGAATCTTTTGC--TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
|| || | |||||| || ||| || | ||||| | | || || || | |||
Sbjct 638842 ATCTTGGA--TTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTG 638899
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||||||||| || || ||
Sbjct 638900 ATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTG 638934
>seq49
Length=1984306
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| ||||| || |||||||| ||||| | ||||||||| | | ||
Sbjct 95363 CGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTA 95422
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || ||||| || ||||||||||| || || |||||||| || |||||
Sbjct 95423 CGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCC 95482
Query 199529 TCT 199531
|||
Sbjct 95483 TCT 95485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178919968667236
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |