Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq73 170 2e-37
seq49 98.7 1e-15
>seq73
Length=4627324
Score = 170 bits (188), Expect = 2e-37
Identities = 203/275 (74%), Gaps = 3/275 (1%)
Strand=Plus/Minus
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
|| |||||||||||| || || | || ||||| | || ||||| ||| || |||
Sbjct 220689 TATGTGTCGATGAGGAGGGAGTAGGTCTCAGAGTGAATATTTTCCATCATGATCTGGAAG 220630
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
||||| ||||| || |||||| ||||| |||||| ||||||||||||||| |||
Sbjct 220629 CCGTAGAAGCAGCGAGCCTCGGGAACCTGAACTTCTCCGCTGAAACGCTCGACCAGGTTT 220570
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
|||||||||||||| || |||||||| || |||| ||||| |||||| | |||
Sbjct 220569 TCGTTGACGATGCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATGAAGTACCGC 220510
Query 133348 TCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
|||| || ||||| | | ||||||| | ||| || || || || | || ||
Sbjct 220509 TCGTCATCATTCAATCTGTTGTTCCAGTCGTGAAGGTCTTTTGAGAGATCAATTTCTTCT 220450
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
||||||| ||||||||||| ||||||||||||||
Sbjct 220449 GCGGTCCAGAACGACGCCTCTGCTTTTTTGTACAT 220415
Score = 118 bits (130), Expect = 1e-21
Identities = 337/506 (67%), Gaps = 18/506 (4%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| || || ||||| || || || || || || || || || ||| ||| |||
Sbjct 221310 TTCTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTG 221251
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG---TGCTTGGTGCCGATCAGGTCGACG 132720
||| || || || ||||||| | ||| ||| | |||| |||| | || | |||
Sbjct 221250 TCCATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAA-AG--CAACG 221194
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779
|| || | || || |||||||| |||||||| ||||| | || || || | ||| ||
Sbjct 221193 AGGAGGCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCG-TTCATTCCAAG 221135
Query 132780 CAGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838
|| ||| ||||| || || || | || || |||||||| | ||| || || ||||
Sbjct 221134 AAG-CGCGACCGGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGA 221076
Query 132839 CGATTTCCCTAACGCGCGCCGC---GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGC 132895
||| ||| || ||| | ||| || || || ||| || ||| | | |
Sbjct 221075 TGAT---CCTCTCGACAGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAGAC 221019
Query 132896 AAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGC 132955
| || || || || ||||||||||| | ||||| || ||||| || || | ||
Sbjct 221018 AGGCGAAATCAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGC 220959
Query 132956 CGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGA 133015
| ||||||||||| ||||| || | ||| || || | ||||| || |||||||
Sbjct 220958 CAGGCATGAGGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGA 220899
Query 133016 CGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGCG 133074
||| |||||||| ||||| || || || |||| | || |||| || ||| || ||
Sbjct 220898 TGCCTTCGACGGCAGCGAAGGCGACGAGACGCTGTGCAAAGGTGGACTCCTTATCT-TCG 220840
Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTT 133100
||||| || | ||||| || |||||
Sbjct 220839 ATCCACCGGATAGCCCAATCAGCCTT 220814
>seq49
Length=1984306
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
|||||||||||||| ||| ||||||| || || || || | ||| ||||||||||| ||
Sbjct 95490 GACAAAGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAACAGCTCGAG 95431
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | || ||||| |||||||||||| ||||| || |||| || || | || |||
Sbjct 95430 GATGGCCGTACCCTTTCCGACTACAACATTCAAAAAGAGTCGACCCTTCACCTCGTCCTG 95371
Query 38457 CGTTTGAGAGGCGG 38470
||| || | || ||
Sbjct 95370 CGTCTGCGTGGTGG 95357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172124766720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |