Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq73 170 2e-37 seq49 98.7 1e-15 >seq73 Length=4627324 Score = 170 bits (188), Expect = 2e-37 Identities = 203/275 (74%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || |||||||||||| || || | || ||||| | || ||||| ||| || ||| Sbjct 220689 TATGTGTCGATGAGGAGGGAGTAGGTCTCAGAGTGAATATTTTCCATCATGATCTGGAAG 220630 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| || |||||| ||||| |||||| ||||||||||||||| ||| Sbjct 220629 CCGTAGAAGCAGCGAGCCTCGGGAACCTGAACTTCTCCGCTGAAACGCTCGACCAGGTTT 220570 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 |||||||||||||| || |||||||| || |||| ||||| |||||| | ||| Sbjct 220569 TCGTTGACGATGCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATGAAGTACCGC 220510 Query 133348 TCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| || ||||| | | ||||||| | ||| || || || || | || || Sbjct 220509 TCGTCATCATTCAATCTGTTGTTCCAGTCGTGAAGGTCTTTTGAGAGATCAATTTCTTCT 220450 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| ||||||||||| |||||||||||||| Sbjct 220449 GCGGTCCAGAACGACGCCTCTGCTTTTTTGTACAT 220415 Score = 118 bits (130), Expect = 1e-21 Identities = 337/506 (67%), Gaps = 18/506 (4%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || || || || || || || || || ||| ||| ||| Sbjct 221310 TTCTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTG 221251 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG---TGCTTGGTGCCGATCAGGTCGACG 132720 ||| || || || ||||||| | ||| ||| | |||| |||| | || | ||| Sbjct 221250 TCCATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAA-AG--CAACG 221194 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779 || || | || || |||||||| |||||||| ||||| | || || || | ||| || Sbjct 221193 AGGAGGCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCG-TTCATTCCAAG 221135 Query 132780 CAGACGC-ACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 || ||| ||||| || || || | || || |||||||| | ||| || || |||| Sbjct 221134 AAG-CGCGACCGGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGA 221076 Query 132839 CGATTTCCCTAACGCGCGCCGC---GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGC 132895 ||| ||| || ||| | ||| || || || ||| || ||| | | | Sbjct 221075 TGAT---CCTCTCGACAGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAGAC 221019 Query 132896 AAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGC 132955 | || || || || ||||||||||| | ||||| || ||||| || || | || Sbjct 221018 AGGCGAAATCAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGC 220959 Query 132956 CGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGA 133015 | ||||||||||| ||||| || | ||| || || | ||||| || ||||||| Sbjct 220958 CAGGCATGAGGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGA 220899 Query 133016 CGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGCG 133074 ||| |||||||| ||||| || || || |||| | || |||| || ||| || || Sbjct 220898 TGCCTTCGACGGCAGCGAAGGCGACGAGACGCTGTGCAAAGGTGGACTCCTTATCT-TCG 220840 Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||||| || | ||||| || ||||| Sbjct 220839 ATCCACCGGATAGCCCAATCAGCCTT 220814 >seq49 Length=1984306 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 |||||||||||||| ||| ||||||| || || || || | ||| ||||||||||| || Sbjct 95490 GACAAAGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAACAGCTCGAG 95431 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | || ||||| |||||||||||| ||||| || |||| || || | || ||| Sbjct 95430 GATGGCCGTACCCTTTCCGACTACAACATTCAAAAAGAGTCGACCCTTCACCTCGTCCTG 95371 Query 38457 CGTTTGAGAGGCGG 38470 ||| || | || || Sbjct 95370 CGTCTGCGTGGTGG 95357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172124766720