Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq50 123 1e-22 seq75 113 2e-19 >seq50 Length=1359123 Score = 123 bits (136), Expect = 1e-22 Identities = 249/368 (68%), Gaps = 11/368 (3%) Strand=Plus/Plus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||||| || || ||||| || || || |||| ||| || || || |||| Sbjct 182245 CTCCCGAAGAAATCTCCTCCATGGTCCTCACCAAGATGAGAGAGACTGCTGAGTCATATC 182304 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 ||||| | || | | | || || | ||||||||||| || |||||||| | |||| Sbjct 182305 TTGGTGGCACCGTCAATAACGCCGTTGTCACTGTTCCCGCCTACTTCAATGACTCCCAAC 182364 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || || ||||| || | ||||||||| | ||||| || || || || || | Sbjct 182365 GCCAAGCTACCAAGGATGCTGGTCTCATTGCTGGTCTCAATGTCCTCCGTATCATCAACG 182424 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAA-CAGA---AGaa 451477 | ||||| || ||||| | || || || || | | |||||| | || ||| Sbjct 182425 AGCCTACTGCTGCTGCCATTGCTTACGGCCT-------TGACAAGAAAGCCGAGGGTGAA 182477 Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537 ||| || | | || || || ||||| || ||| || ||| | ||| | || Sbjct 182478 CGCAATGTTCTCATTTTCGACTTGGGTGGTGGCACTTTCGACGTTTCCCTCCTTACTATC 182537 Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 ||||| || | || || || ||| | || ||||| |||||||| || ||||| || Sbjct 182538 GAAGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGTGACACTCATCTGGGTGGTGAGGAC 182597 Query 451598 ATTGATAA 451605 | ||||| Sbjct 182598 TTCGATAA 182605 >seq75 Length=1151455 Score = 113 bits (124), Expect = 2e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || |||||||| || ||||| || ||||| ||||||||||| || ||| || Sbjct 639166 AATGCAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAAAGCTC 639107 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| |||||| ||||| |||||||||||||| ||||| || || || || || Sbjct 639106 AGATACCATTGACAACGTTAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCAGACCA 639047 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||| | || ||| | || ||||| ||||| || || |||| | | || || || Sbjct 639046 GCAACGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTACAA 638987 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 ||| | || || | ||||| ||| Sbjct 638986 TATCCAAAAAGAATCCACACTCCAC 638962 Score = 98.7 bits (108), Expect = 4e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| ||||| || |||||||| || ||||| || || || Sbjct 638937 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAAACTATCACACTTGAAGTCGAGAGCTCC 638878 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | ||| ||||| |||||||||||||| ||||| || ||||| Sbjct 638877 GACACAATTGATAACGTAAAAAGCAAAATCCAAGATAAGGAAGGGATTCCACCAGATCAG 638818 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || || || |||||||| | || | | |||||||| Sbjct 638817 CAGCGTCTCATCTTTGCTGGTAAGCAGCTAGAAGATGGCCGGACGCTTTCTGATTATAAC 638758 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTG 391268 ||| | ||||| || || || || || || ||| || Sbjct 638757 ATTCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGATTG 638719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975715666099664