Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq50 111 1e-18 seq32 93.3 3e-13 >seq50 Length=1359123 Score = 111 bits (122), Expect = 1e-18 Identities = 410/637 (64%), Gaps = 4/637 (1%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 ||||| || ||||| || || ||||| |||| | ||| | || | || | | || Sbjct 182614 ACAAGGCGGTTATCGAAGTCCTCACCACCCAGATGAGTGTCACCGGCAGTGGACTTGACC 182555 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || ||||| | || | || | || || || |||||||||| || Sbjct 182554 TCGAAGATACCCTCTTCGATAGTAAGGAGGGAAACGTCGAAAGTGCCACCACCCAAGTCG 182495 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 ||||| || ||||| ||| || || || ||||| || || |||| |||||| Sbjct 182494 AAAATGAGAACATTGCGTTCACCCTCGGCTTTCTTGTCAAGGCCGTAAGCAATGGCAGCA 182435 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || || || || || | | ||||| ||||||||||| || ||||| || Sbjct 182434 GCAGTAGGCTCGTTGATGATACGGAGGACATTGAGACCAGCAATGAGACCAGCATCCTTG 182375 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || ||||| | ||| || || || || || || |||||||| | |||||| | | | || Sbjct 182374 GTAGCTTGGCGTTGGGAGTCATTGAAGTAGGCGGGAACAGTGACAACGGCGTTATTGACG 182315 Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 ||||| ||| | || || | | |||| || | | | ||| || || ||| Sbjct 182314 GTGCCACCAAGATATGACTCAGCAGTCTCTCTCATCTTGGTGAGGACCATGGAGGAGATT 182255 Query 518375 TGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT 518433 | ||| || | | | ||| | || |||| | | || | | | || || Sbjct 182254 TCTTCGGGAGTGAACTCCTTCGTCTCGCCCTTGAACTCAATCTGAATGACA-GGCTTGCC 182196 Query 518434 ACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG-GTCAT 518492 ||| | ||| | || || || | | |||||||| || || || || | || Sbjct 182195 ACCCTTGTCAATGATCTTGAAGGGGAAATGCTTCATATCAGACTGGAC-CTCAGCATCGG 182137 Query 518493 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552 || | | ||||| | || ||||| || |||| |||||| |||| || || || Sbjct 182136 CGAACTTGCGGCCAATGAGACGCTTTGCGTCGAAAACTGTATTGCTTGGGTTCATGGCGA 182077 Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 518612 |||||| || || ||||| || || ||| | ||||| ||||| || | ||| | || | Sbjct 182076 CTTGATTCTTTGCAGCATCGCCGATGAGACGCTCTGTGTCTGTGAAGGCAACGAACGAGG 182017 Query 518613 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649 | || || || ||||| || || || ||||| ||||| Sbjct 182016 GCGTGGTCCGGTTACCCTGGTCGTTGGCAATGATTTC 181980 >seq32 Length=920050 Score = 93.3 bits (102), Expect = 3e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 671659 TGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAAC 671718 ||||||||||||||| | ||||| |||||||| ||| ||||| |||| ||| | || || Sbjct 392152 TGAATTTTTCTTCCATGCTATGGCTGGTCGTGAGGGTCTTATTGATACAGCTGTCAAGAC 392093 Query 671719 TGCTGATACTGGTTATATTCAAAGAAAACTTGTTAA 671754 |||||| ||||| ||||||||| | || || || || Sbjct 392092 TGCTGAAACTGGATATATTCAACGGAAGCTGGTCAA 392057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780817040684248