Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq50 111 1e-18
seq32 93.3 3e-13
>seq50
Length=1359123
Score = 111 bits (122), Expect = 1e-18
Identities = 410/637 (64%), Gaps = 4/637 (1%)
Strand=Plus/Minus
Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074
||||| || ||||| || || ||||| |||| | ||| | || | || | | ||
Sbjct 182614 ACAAGGCGGTTATCGAAGTCCTCACCACCCAGATGAGTGTCACCGGCAGTGGACTTGACC 182555
Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134
| ||| | || ||||| | || | || | || || || |||||||||| ||
Sbjct 182554 TCGAAGATACCCTCTTCGATAGTAAGGAGGGAAACGTCGAAAGTGCCACCACCCAAGTCG 182495
Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194
||||| || ||||| ||| || || || ||||| || || |||| ||||||
Sbjct 182494 AAAATGAGAACATTGCGTTCACCCTCGGCTTTCTTGTCAAGGCCGTAAGCAATGGCAGCA 182435
Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254
||||| || || || || || | | ||||| ||||||||||| || ||||| ||
Sbjct 182434 GCAGTAGGCTCGTTGATGATACGGAGGACATTGAGACCAGCAATGAGACCAGCATCCTTG 182375
Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314
|| ||||| | ||| || || || || || || |||||||| | |||||| | | | ||
Sbjct 182374 GTAGCTTGGCGTTGGGAGTCATTGAAGTAGGCGGGAACAGTGACAACGGCGTTATTGACG 182315
Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374
||||| ||| | || || | | |||| || | | | ||| || || |||
Sbjct 182314 GTGCCACCAAGATATGACTCAGCAGTCTCTCTCATCTTGGTGAGGACCATGGAGGAGATT 182255
Query 518375 TGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT 518433
| ||| || | | | ||| | || |||| | | || | | | || ||
Sbjct 182254 TCTTCGGGAGTGAACTCCTTCGTCTCGCCCTTGAACTCAATCTGAATGACA-GGCTTGCC 182196
Query 518434 ACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG-GTCAT 518492
||| | ||| | || || || | | |||||||| || || || || | ||
Sbjct 182195 ACCCTTGTCAATGATCTTGAAGGGGAAATGCTTCATATCAGACTGGAC-CTCAGCATCGG 182137
Query 518493 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552
|| | | ||||| | || ||||| || |||| |||||| |||| || || ||
Sbjct 182136 CGAACTTGCGGCCAATGAGACGCTTTGCGTCGAAAACTGTATTGCTTGGGTTCATGGCGA 182077
Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 518612
|||||| || || ||||| || || ||| | ||||| ||||| || | ||| | || |
Sbjct 182076 CTTGATTCTTTGCAGCATCGCCGATGAGACGCTCTGTGTCTGTGAAGGCAACGAACGAGG 182017
Query 518613 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649
| || || || ||||| || || || ||||| |||||
Sbjct 182016 GCGTGGTCCGGTTACCCTGGTCGTTGGCAATGATTTC 181980
>seq32
Length=920050
Score = 93.3 bits (102), Expect = 3e-13
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 671659 TGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAAC 671718
||||||||||||||| | ||||| |||||||| ||| ||||| |||| ||| | || ||
Sbjct 392152 TGAATTTTTCTTCCATGCTATGGCTGGTCGTGAGGGTCTTATTGATACAGCTGTCAAGAC 392093
Query 671719 TGCTGATACTGGTTATATTCAAAGAAAACTTGTTAA 671754
|||||| ||||| ||||||||| | || || || ||
Sbjct 392092 TGCTGAAACTGGATATATTCAACGGAAGCTGGTCAA 392057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780817040684248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |