Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq50 268 1e-66 seq79 131 2e-25 seq25 100 4e-16 >seq50 Length=1359123 Score = 268 bits (296), Expect = 1e-66 Identities = 517/752 (69%), Gaps = 22/752 (3%) Strand=Plus/Minus Query 7404 CTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 |||| ||| ||| ||||| ||||| || | | ||||| || || | |||||| Sbjct 182655 CTTTTTTAGTTTTGCGTTTGAACTCGTTTACA-AAGTGGTTAACAAGGCGGTTATCGAAG 182597 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || |||||||||| || || || || || || | ||||| || |||||||| |||| Sbjct 182596 TCCTCACCACCCAGATGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCCTCTTCG 182537 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGT 7581 || | | | ||||| || || || |||||||||| ||| |||||||| || || ||| Sbjct 182536 ATAGTAAGGAGGGAAACGTCGAAAGTGCCACCACCCAAGTCGAAAATGAGAACATTGCGT 182477 Query 7582 --ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 | | ||| |||| ||| || || ||||| || || || || || || || || || Sbjct 182476 TCACCCTCGGCTTT---CTTGTCAAGGCCGTAAGCAATGGCAGCAGCAGTAGGCTCGTTG 182420 Query 7640 ATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 || ||||| || ||| || || |||||||| | ||||| || || ||||| ||||| Sbjct 182419 ATGATACGGAGGACA-TTGAGACCAGCAATGAGACCAGCATCCTTGGTAGCTTGGCGTTG 182361 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 || || || |||||||| || || || || || |||| |||| | ||| ||||| Sbjct 182360 GGAGTCATTGAAGTAGGCGGGAACAGTGACAACGGCGTTATTGACGGTGCCACCAAGATA 182301 Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818 || || || | ||| |||| ||||| || ||||| || || || ||||| | | || Sbjct 182300 TGACTCAGCAGTCTCTCTCATCTTGGTGAGGACCATGGAGGAGATTTCTTCGGGAGTGAA 182241 Query 7819 CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG-- 7876 || ||||| || || || || |||| | ||| | || || || |||| | Sbjct 182240 CTCCTTCGTCTCGCCCTTGAACTCAATCTGAATGACAGGCTT----GC--CACCCTTGTC 182187 Query 7877 -ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 || | ||| | | ||| |||||||| ||||||| || | ||||| | Sbjct 182186 AATGATCTTGAAGGGGAAATGCTTCATATCAGACTGGACCTCAGCATCGGCGAACTTGCG 182127 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 || || ||||||||||| || |||||||| || | ||||||||||| ||| ||||| Sbjct 182126 GCCAATGAGACGCTTTGCGTCGAAAACTGTATTGCTTGGGTTCATGGCGACTTGATTCTT 182067 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || ||||| ||||| || | || || || || ||| |||| || || || Sbjct 182066 TGCAGCATCGCCGATGAGACGCTC---TGTGTCTGTGAAGGCAACGAACGAGGGCGTGGT 182010 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || |||||||| ||||| ||||| | |||||| | | ||| || ||||| Sbjct 182009 CCGGTTACCCTGGTCGTTGGCAATGATTTCGATGCGGTCATCACGGTAGATACCCACGCA 181950 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTG 8147 || || || || || ||||| ||||| |||| Sbjct 181949 GGAGTAGGTGGTACCCAAATCGATACCTATTG 181918 Score = 138 bits (152), Expect = 1e-27 Identities = 268/396 (68%), Gaps = 0/396 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | ||||| || || ||||| | || ||||| || || |||||||| || || Sbjct 183242 TCACCAGACAAGATAGCAGCCTGGACGGCAGCACCGTAGGCAACGGCCTCATCAGGATTG 183183 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || |||| || | | | || || | ||| Sbjct 183182 ATGGACTTGTTTGGCTCCTTTCCGTTGAAGAAATCGGAGACGAGCTTCTGGATCCTGGGG 183123 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | |||||||| | || |||||||||||||| | | Sbjct 183122 ATACGGGTAGAGCCACCGACGAGGACGATTTCGTGGACGGAGGATTTATCGATCTTGGCG 183063 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || || || ||||| ||||| | ||| || || ||| Sbjct 183062 TCACGGAGGACACGCTCAACTGGCTCCATGGTGGAGCGGAAGAGATCCTGGCAAAGCTCC 183003 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| ||||| || |||||||| | || ||||| | || || ||| Sbjct 183002 TCGAAACGGGCACGGGTGATGGAGGTGTAGAAATCGATACCCTCGTACAGAGAGTCGATT 182943 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||||| || || || | || || | || ||||| || || || || || || || Sbjct 182942 TCAATGGAAGTCTGAGCAGCAGAGGAAAGGGTGCGCTTGGCACGTTCGCAAGCAGTGCGG 182883 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 | ||| || ||||| || | ||| ||| | |||| Sbjct 182882 AGACGGCGGAGGGCGCGTGCGTTGGAGGAGAGATCT 182847 >seq79 Length=405269 Score = 131 bits (144), Expect = 2e-25 Identities = 400/614 (65%), Gaps = 11/614 (2%) Strand=Plus/Plus Query 105464 CGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCT 105523 |||| |||||||||||| | |||||||| | || || || || | | || || | Sbjct 293910 CGTACTTCTCGTAAAGAGCCTCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTT 293969 Query 105524 GATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTG 105583 || || ||||| | | ||| | |||| ||||| |||||||| |||| ||| | Sbjct 293970 CATTGGGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGG 294029 Query 105584 GAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAAC 105643 | |||| | || ||||| || ||| || | || || | || || ||| || Sbjct 294030 GTGTCCAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTAC 294089 Query 105644 GAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTC----TAAATAG--ACTGCAA 105697 ||| || | || |||| ||||||| |||||| || || ||||||| | || Sbjct 294090 GAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTC 294149 Query 105698 TAGACCCTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTA 105757 | || || || ||| || | ||||||||| || || ||| | ||||| | Sbjct 294150 CCGGCCGCTTGTTACCTCCC---TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCA 294206 Query 105758 ACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCAC 105817 ||| |||| || || | ||| | ||||| ||||| ||| | || | | ||| Sbjct 294207 GCATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCAC 294266 Query 105818 GTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACAC-TCT 105876 | | ||||| || | |||||||| ||||| ||| || ||||| ||| Sbjct 294267 GAATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCT 294326 Query 105877 TTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGAT 105936 | || || ||||||||||| |||||||| || ||||| | | || ||||| ||||| Sbjct 294327 TCAAC-GTGTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAA 294385 Query 105937 GACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAA 105996 | ||| || ||| || |||||||||||||| || || || | ||||| |||| || Sbjct 294386 GCCATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAAT 294445 Query 105997 CCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCA 106056 || || | | |||||||| | ||| | || | ||||| ||| ||||| || Sbjct 294446 TTTTGAGACATGAGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCG 294505 Query 106057 ATAGCGACGCGCAT 106070 | ||| || ||||| Sbjct 294506 ACAGCAACACGCAT 294519 >seq25 Length=1692869 Score = 100 bits (110), Expect = 4e-16 Identities = 225/331 (68%), Gaps = 14/331 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || || |||||||| | || ||||| || ||| | |||||||||||| | ||| Sbjct 1403266 ATCAAAGTCCTCACCACCAAGATGGGTATCACCGTTGGTGGATTTGACTTCAAACACACC 1403207 Query 7516 TCCTTCAATGTTTAACAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAAT---GA 7571 || ||| || || || | | | ||| || ||||| || || |||||| | | || Sbjct 1403206 CTTTTGAAT-TTCAAGAATGGAGATATCGAAAGTACCTCCGCCAAGGTCATAGACAGCGA 1403148 Query 7572 GTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 ||| || ||| | || |||| ||||||||| || | ||| || || || | Sbjct 1403147 CCACG--CG-ATCCTGCTCAC-GTTC-----GAGACCGTAGGCAAGAGCAGCAGCTGTAG 1403097 Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 | || || | || ||| || ||| || |||||||| | |||||||| || |||| Sbjct 1403096 GCTCGTTGACAACACGGAGCACGTTAAGACCAGCAATCTGACCAGCATCTTTGGTAGCTT 1403037 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | ||||| ||||| || |||||||| ||||| || || || ||| | || ||| Sbjct 1403036 GACGTTGGGAATCATTGAAGTAGGCGGGGACTGTGACAACACCGTTTTTCACAGGTCTAC 1402977 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTT 7782 | ||||| | ||| || | || |||||||| Sbjct 1402976 CAAGATAGGCTTCAGCAGTCTCCTTCATTTT 1402946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131942570720