Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq79 150 2e-31 seq73 98.7 1e-15 >seq79 Length=405269 Score = 150 bits (166), Expect = 2e-31 Identities = 532/813 (65%), Gaps = 20/813 (2%) Strand=Plus/Minus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | |||||||| | ||||||| |||||||||| |||| |||||||||||| ||| Sbjct 293801 TGGTATGCTATTCTTGAAGCTCAAACTGAGACTGGTAACCCATTTATGCTTTACAAGGAC 293742 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 || || ||| | ||||| ||||||||||| | || || | || || ||||| || Sbjct 293741 GCGTGCAACAAGAAGAGCAATCAAAAGAACCTCGGCACAATTAGAAGCTCTAACCTATGC 293682 Query 112398 ACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 112456 || || ||| | |||| || | | |||||| || || |||||||| || || || Sbjct 293681 ACTGAGATCATCGAATATTGCTCGC-CAGATGAAGTTGCAGTTTGTAACCTGGCGTCTAT 293623 Query 112457 CGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATTATGAAAAACTCCACG 112515 ||| | || | | ||||||| | | | || | | ||||| | || ||||||| Sbjct 293622 TGCTTTGCCTACTTTTGTGGATGCTG-TCCGGGGAGAGTATGATTTCGGCAAGCTCCACG 293564 Query 112516 AAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG 112575 |||| || | ||| || || |||| | || ||| | || | || || | Sbjct 293563 AAGTAACTCAGGTCGTCGTTCGCAATCTTAACAAGATCATCGATCGGAACTACTATCCGG 293504 Query 112576 TTGAGACTGC---TCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAG 112632 | ||| || || || | ||| | | || ||||| |||| | ||||||||| | Sbjct 293503 TCGAGGAAGCAAAACG--AAGC-AATTTCCGTCATCGTCCCATTGCTTGCGGTGTCCAGG 293447 Query 112633 GTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAA 112691 |||| || |||| ||| || ||||| || | |||| |||||| ||| || ||| | Sbjct 293446 GTCTTGCTGATGCTTTCCTTGCTTTG-CGGCTTCCATTCGATTCCCCCGAGGCTAAGCAG 293388 Query 112692 ATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GGCGAGTTCGGAGTT 112750 | || | || || || ||||| || ||||| | | |||| ||| || || || Sbjct 293387 TTGAACATTCAAATTTTCGAAACAATCTACCACGCGGGT-TTGACTGCGTCTTGTGAATT 293329 Query 112751 GGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCT 112810 ||| | |||| || ||||| || | ||| ||||| |||| ||| ||||| | || Sbjct 293328 GGCTAAAATTGACGGCCCATACTCCACGTATGAAGGTTCCCCAGTTTCCCAAGGCATCCT 293269 Query 112811 TCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTCTCAAGG 112869 ||||| |||||||| |||| || | || | | | || || |||||| | || || Sbjct 293268 TCAATATGATATGT-GGAACGTCACTCCCACCGACCTCTGGGATTGGGACTCGCTGAAAC 293210 Query 112870 AACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCT 112929 || || || | || ||||||| ||| | | | || || ||||| || ||| Sbjct 293209 AAGATATTGCTAAGCATGGAGTTCGTAATAGTTTGCTTGTTGCGCCCATGCCTACTGCCA 293150 Query 112930 CCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATC 112989 |||| || || |||| || || ||||| ||||||||||| | || || || Sbjct 293149 GCACCAGCCAGATTCTGGGGTTCAACGAGTGCTTCGAACCCTACACCTCCAATATTTACT 293090 Query 112990 TGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCGTGGATGACCT 113047 | | | || ||||| || || |||||||| || | ||| || | ||||| Sbjct 293089 CGCGCCGTGTTCTGGCGGGTGAATTCCAAATTGTCAATCCATG--GCTCCTGAAGGACCT 293032 Query 113048 CAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 113080 | || || ||||| |||||| | | ||||| Sbjct 293031 CGTGGACATGGGTCTATGGTCCGACAACATGAA 292999 Score = 132 bits (146), Expect = 6e-26 Identities = 407/629 (65%), Gaps = 9/629 (1%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| || ||||| ||||||| || || |||| || || || || ||| | || || Sbjct 294535 CCCCCAACACATGATCATGCGTGTTGCTGTCGGAATTCACGGAGACGATGTAGAGAAAGT 294476 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | || ||||| || ||||| | | |||| || || | || ||||| || Sbjct 294475 CATCGAAACATATAACCTCATGTCTCAAAAATTCTTCACGCATGCTTCTCCTACCCTTTT 294416 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| |||||||| || ||| || ||| | || |||||||| | | |||||||| Sbjct 294415 CAATGCTGGTACCCCGCAACCTCAGATGGCTTCGTGCTTCCTTATCGACATGAAGGAGGA 294356 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| | || ||||||| ||| | | |||||| || |||||| ||||| Sbjct 294355 CAGTATCGAGGGTATTTACGACACGTTGAAGACTTGTGCCTTGATTTCAAAGACTGCTGG 294296 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 |||||| || | |||| || | | | || ||| ||| || || || Sbjct 294295 TGGTATTGGCCTCAACATTCACCGCATTCGTGGCACTGGTTCTTACATTGCCGGAACGAA 294236 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 ||| || | || || |||| ||||| || || || ||| ||| || | ||||| Sbjct 294235 TGGCTCCTCCAACGGAATCGTTCCCATGCTGCGAGTTTTCAACAACACTGCTAGATATGT 294176 Query 111971 AAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | || | |||| ||| || |||| | || |||||||| ||||| Sbjct 294175 CGACCAGGGAGG---TAACAAGCGGCCGGGAGCTTTCGCTATTTACCTTGAGCCGTGGCA 294119 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 | | |||||| | || ||| | || | ||| ||||| || | ||||| | ||| Sbjct 294118 CACCGATATCTTCGAATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGAAGTTCGGGC 294059 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 |||||||||||| |||||||||| || ||||| || ||||| | |||||| | | Sbjct 294058 TCGCGATCTCTTCCTGGCTCTCTGGACACCCGATCTGTTTATGAAACGTGTTGAGAAAAA 293999 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 |||| | ||| |||||||||| || | | || || || | | |||| | || || Sbjct 293998 TGGCGAATGGACTCTCTTTTGCCCCAATGAAGCCCCAGGCTTGGCGGATGTCTATGGCGA 293939 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACG 112233 |||||||| || || ||| ||||||| Sbjct 293938 CGAGTTTGAGGCTCTTTACGAGAAGTACG 293910 >seq73 Length=4627324 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169 |||||| || || | ||||| || ||||||||||| |||| | || ||| | Sbjct 220795 AGTTCCCTGCATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTC 220854 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 ||||||| |||| ||| |||| || || || || || ||||||||| ||| || Sbjct 220855 CACCTTTGCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATC 220914 Query 102230 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289 |||| | || | ||| | ||||| || || |||||||| || || || || || Sbjct 220915 CTTCGCTTCGATCTTCTGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAA 220974 Query 102290 CGAGCTTATCTCTCGTGACGAGGG 102313 ||||||||| |||||||||||||| Sbjct 220975 CGAGCTTATTTCTCGTGACGAGGG 220998 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 102537 AACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTC 102596 ||||||| || ||||||||||||||||| ||||| ||| | ||| ||||| |||||| Sbjct 221222 AACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGCAAGACCAACTTC 221281 Query 102597 TTCGAAAAGAGGGTTGGGGACTA 102619 ||||||||| | || || ||||| Sbjct 221282 TTCGAAAAGCGTGTCGGCGACTA 221304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741561997760