Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq79 129 7e-25
seq27 104 3e-17
seq65 96.9 4e-15
seq21 96.9 4e-15
>seq79
Length=405269
Score = 129 bits (142), Expect = 7e-25
Identities = 412/632 (65%), Gaps = 8/632 (1%)
Strand=Plus/Plus
Query 110513 CGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCT 110572
||||||| ||| | ||||||| || | || || ||||| | | | ||| | ||
Sbjct 293910 CGTACTTCTCGTAAAGAGCCTCAAACTCGTCGCCATAGACATCCGCCA-AGCCTGGGGCT 293968
Query 110573 TG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631
| | ||| || ||||| | ||| | ||| | |||||| | ||||| ||||| ||
Sbjct 293969 TCATTGGGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCG 294028
Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691
|| |||| | ||| ||| || || || ||| | || || | || |||||
Sbjct 294029 GGTGTCCAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTA 294088
Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751
|| || ||||| || || | |||||| | |||||| || || || || | ||||| | |
Sbjct 294089 CGAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCT 294148
Query 110752 CCCTTACGACG---ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808
||| || ||| |||||| ||||| | || ||| ||||| || | |||
Sbjct 294149 CCCGGCCGCTTGTTACCTCCCTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGC 294208
Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868
|| |||| ||||| | ||| ||||| || || ||| || | || |||||
Sbjct 294209 ATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGA 294268
Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGT 110927
||| ||| || | | ||||||||||| || ||| ||| |||| | ||| |
Sbjct 294269 ATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCT-T 294327
Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987
| || | |||||||| || || || |||| || | || || ||||| ||||
Sbjct 294328 CAACGTGTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGC 294387
Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047
||||||||| | || || || |||||||| || ||||| | ||||| |||| |
Sbjct 294388 CATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTT 294447
Query 111048 TTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAAT 111107
||| ||||| ||| ||||| |||| | |||||| | |||||||| || |
Sbjct 294448 TTGAGACATGAGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGAC 294507
Query 111108 GGCAACTCGCATGAACATATATT-GAGGCGTT 111138
||||| ||||||| ||| | || | ||||||
Sbjct 294508 AGCAACACGCATGATCATGTGTTGGGGGCGTT 294539
>seq27
Length=845112
Score = 104 bits (114), Expect = 3e-17
Identities = 276/414 (67%), Gaps = 21/414 (5%)
Strand=Plus/Plus
Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565
|| || || || || || || || || | |||||| ||||| || || ||||| | ||
Sbjct 463351 TCAAATCGGCCAGGTCGCAGCAGTGCCTTATCAAGGATATCAACTCGATTTGTTCCAGCC 463410
Query 11566 ATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622
| || |||| | || ||| ||| ||| || |||||||||||||||| || ||
Sbjct 463411 AGAACGACAA--CTTGT-TCAGAAGTGTTGAAGCCATCCATTTCTGTGAGAATTTGATTC 463467
Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCAT-ACCACCTGC------CGAACGCTTCTT 11675
| ||| ||| ||||| ||||| || |||| || ||| | | |||
Sbjct 463468 AGCGTGCTTTCCCGCTCGTCGTTTC----CACCACCATAAGCGTTTTTCGACCTCGACTT 463523
Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735
|| | ||| ||||||||||| ||||||| ||||| || ||| || || |
Sbjct 463524 CCCAATAGCATCAATCTCATCAATGAATATAATACAAGGGGTGTTTTTCCGAGCAGTGGC 463583
Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CG 11793
|| || || || || || | |||||||| |||||||| || ||||| | | |
Sbjct 463584 AAATAGATCGCGAACTCGGGAAGGCCCAACACCAACGAACATTTCGACGAATTCGGAACC 463643
Query 11794 GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853
|| | | ||| | || |||||| ||||| ||||| | ||| || || | |||
Sbjct 463644 GCTCA-CGCTGTAA-AACGGAACACCCGACTCGCCAGCTGTAGCTTTTGCCAGTAATGTC 463701
Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907
||||| ||||| |||| |||| || | ||||| ||||||||||||||||||
Sbjct 463702 TTACCGGTACCCGGTGGCCCAGAAAGGATAGCGCCTCGGGGGATCTTGGCACCA 463755
>seq65
Length=372002
Score = 96.9 bits (106), Expect = 4e-15
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 130183 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGT 130242
Query 136776 TGGGAACA 136783
||||| ||
Sbjct 130243 TGGGACCA 130250
Score = 96.9 bits (106), Expect = 4e-15
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 130668 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGT 130609
Query 136776 TGGGAACA 136783
||||| ||
Sbjct 130608 TGGGACCA 130601
>seq21
Length=1343978
Score = 96.9 bits (106), Expect = 4e-15
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 1215492 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGT 1215551
Query 136776 TGGGAACA 136783
||||| ||
Sbjct 1215552 TGGGACCA 1215559
Score = 96.9 bits (106), Expect = 4e-15
Identities = 75/89 (84%), Gaps = 4/89 (4%)
Strand=Plus/Minus
Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 1216556 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGT 1216497
Query 136776 TGGGAACAGCTTTTAGATATATTTTTTGT 136804
||||| || | | || | ||||||||
Sbjct 1216496 TGGGACCA----TAAAATTTTTTTTTTGT 1216472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975204882400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |