Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq79 129 7e-25 seq27 104 3e-17 seq65 96.9 4e-15 seq21 96.9 4e-15 >seq79 Length=405269 Score = 129 bits (142), Expect = 7e-25 Identities = 412/632 (65%), Gaps = 8/632 (1%) Strand=Plus/Plus Query 110513 CGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCT 110572 ||||||| ||| | ||||||| || | || || ||||| | | | ||| | || Sbjct 293910 CGTACTTCTCGTAAAGAGCCTCAAACTCGTCGCCATAGACATCCGCCA-AGCCTGGGGCT 293968 Query 110573 TG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | | ||| || ||||| | ||| | ||| | |||||| | ||||| ||||| || Sbjct 293969 TCATTGGGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCG 294028 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 || |||| | ||| ||| || || || ||| | || || | || ||||| Sbjct 294029 GGTGTCCAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTA 294088 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 || || ||||| || || | |||||| | |||||| || || || || | ||||| | | Sbjct 294089 CGAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCT 294148 Query 110752 CCCTTACGACG---ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 ||| || ||| |||||| ||||| | || ||| ||||| || | ||| Sbjct 294149 CCCGGCCGCTTGTTACCTCCCTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGC 294208 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868 || |||| ||||| | ||| ||||| || || ||| || | || ||||| Sbjct 294209 ATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGA 294268 Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGT 110927 ||| ||| || | | ||||||||||| || ||| ||| |||| | ||| | Sbjct 294269 ATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCT-T 294327 Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987 | || | |||||||| || || || |||| || | || || ||||| |||| Sbjct 294328 CAACGTGTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGC 294387 Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047 ||||||||| | || || || |||||||| || ||||| | ||||| |||| | Sbjct 294388 CATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTT 294447 Query 111048 TTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAAT 111107 ||| ||||| ||| ||||| |||| | |||||| | |||||||| || | Sbjct 294448 TTGAGACATGAGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGAC 294507 Query 111108 GGCAACTCGCATGAACATATATT-GAGGCGTT 111138 ||||| ||||||| ||| | || | |||||| Sbjct 294508 AGCAACACGCATGATCATGTGTTGGGGGCGTT 294539 >seq27 Length=845112 Score = 104 bits (114), Expect = 3e-17 Identities = 276/414 (67%), Gaps = 21/414 (5%) Strand=Plus/Plus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 || || || || || || || || || | |||||| ||||| || || ||||| | || Sbjct 463351 TCAAATCGGCCAGGTCGCAGCAGTGCCTTATCAAGGATATCAACTCGATTTGTTCCAGCC 463410 Query 11566 ATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 | || |||| | || ||| ||| ||| || |||||||||||||||| || || Sbjct 463411 AGAACGACAA--CTTGT-TCAGAAGTGTTGAAGCCATCCATTTCTGTGAGAATTTGATTC 463467 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCAT-ACCACCTGC------CGAACGCTTCTT 11675 | ||| ||| ||||| ||||| || |||| || ||| | | ||| Sbjct 463468 AGCGTGCTTTCCCGCTCGTCGTTTC----CACCACCATAAGCGTTTTTCGACCTCGACTT 463523 Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735 || | ||| ||||||||||| ||||||| ||||| || ||| || || | Sbjct 463524 CCCAATAGCATCAATCTCATCAATGAATATAATACAAGGGGTGTTTTTCCGAGCAGTGGC 463583 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CG 11793 || || || || || || | |||||||| |||||||| || ||||| | | | Sbjct 463584 AAATAGATCGCGAACTCGGGAAGGCCCAACACCAACGAACATTTCGACGAATTCGGAACC 463643 Query 11794 GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853 || | | ||| | || |||||| ||||| ||||| | ||| || || | ||| Sbjct 463644 GCTCA-CGCTGTAA-AACGGAACACCCGACTCGCCAGCTGTAGCTTTTGCCAGTAATGTC 463701 Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 ||||| ||||| |||| |||| || | ||||| |||||||||||||||||| Sbjct 463702 TTACCGGTACCCGGTGGCCCAGAAAGGATAGCGCCTCGGGGGATCTTGGCACCA 463755 >seq65 Length=372002 Score = 96.9 bits (106), Expect = 4e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 130183 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGT 130242 Query 136776 TGGGAACA 136783 ||||| || Sbjct 130243 TGGGACCA 130250 Score = 96.9 bits (106), Expect = 4e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 130668 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGT 130609 Query 136776 TGGGAACA 136783 ||||| || Sbjct 130608 TGGGACCA 130601 >seq21 Length=1343978 Score = 96.9 bits (106), Expect = 4e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1215492 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGT 1215551 Query 136776 TGGGAACA 136783 ||||| || Sbjct 1215552 TGGGACCA 1215559 Score = 96.9 bits (106), Expect = 4e-15 Identities = 75/89 (84%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1216556 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGT 1216497 Query 136776 TGGGAACAGCTTTTAGATATATTTTTTGT 136804 ||||| || | | || | |||||||| Sbjct 1216496 TGGGACCA----TAAAATTTTTTTTTTGT 1216472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975204882400