Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq75 176 1e-38
seq49 113 1e-19
>seq75
Length=1151455
Score = 176 bits (194), Expect = 1e-38
Identities = 165/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || ||||| |||||||| |||||||| || | || |||| || || ||
Sbjct 638957 ACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTCCTCA 639016
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || |||||||| |||||||| |||||||| || || |||||||| ||||||
Sbjct 639017 AGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 639076
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
||||| || ||||| |||||||| || || ||||| |||||||| |||| ||| ||
Sbjct 639077 ATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTG 639136
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| |||| || || ||||| | ||||||
Sbjct 639137 CCGGTCAGGGTCTTAACGAAGATCTGCATT 639166
Score = 159 bits (176), Expect = 8e-34
Identities = 157/200 (79%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990
||||| || || ||||| |||||||| || || ||||||| |||| || | ||||||||
Sbjct 639185 ACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAG-GTACGGCCATCTTC 639243
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || |||||||| | ||||| |||||||| || ||||||||||| || ||
Sbjct 639244 GAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTG 639303
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||||| ||| ||||| || ||||| |||||| |||||| || | ||||| |||||
Sbjct 639304 GATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTCTT 639363
Query 195111 TCCTGTCAAAGTTTTTACGA 195130
|| || | ||||| ||||
Sbjct 639364 GCCAGTGAGGGTTTTGACGA 639383
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
|||||| || | || |||||| ||| || ||||| || ||||| | ||| || | ||
Sbjct 638722 TCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCC 638781
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| ||||||||||| || ||||| || || || || ||||| ||||| ||||| ||
Sbjct 638782 ATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTT 638841
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
||||| ||||| || ||||| ||||| ||||| || || || |||||||| || |
Sbjct 638842 ATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGAT 638901
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || |||| |||||| ||||| | |||||
Sbjct 638902 AGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
Score = 100 bits (110), Expect = 6e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | |||||| || ||||| || || || ||||| || | || || | || |||||
Sbjct 639499 AACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGACAGGGTACGGCCGTCTTC 639558
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|| ||||| || ||||||||||| ||||| ||||| ||||| || ||||| ||||| ||
Sbjct 639559 CAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGGATACCTTCCTTGTCCTG 639618
Query 195051 AATTTTTTGCTTGAC 195065
||||| ||||||
Sbjct 639619 GATTTTGGACTTGAC 639633
>seq49
Length=1984306
Score = 113 bits (124), Expect = 1e-19
Identities = 95/117 (81%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || |||||||||||||| ||||| |||| ||| || | ||||| |||
Sbjct 95375 ACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCCTCG 95434
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||| || || |||||||| || ||||| ||||| || || || || |||||||||
Sbjct 95435 AGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCTTTGTCT 95491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480064754836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |