Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq75 176 1e-38 seq49 113 1e-19 >seq75 Length=1151455 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| |||||||| |||||||| || | || |||| || || || Sbjct 638957 ACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTCCTCA 639016 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| |||||||| |||||||| || || |||||||| |||||| Sbjct 639017 AGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 639076 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || ||||| |||||||| || || ||||| |||||||| |||| ||| || Sbjct 639077 ATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTG 639136 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || |||| || || ||||| | |||||| Sbjct 639137 CCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 159 bits (176), Expect = 8e-34 Identities = 157/200 (79%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 ||||| || || ||||| |||||||| || || ||||||| |||| || | |||||||| Sbjct 639185 ACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAG-GTACGGCCATCTTC 639243 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| | ||||| |||||||| || ||||||||||| || || Sbjct 639244 GAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTG 639303 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||||| ||| ||||| || ||||| |||||| |||||| || | ||||| ||||| Sbjct 639304 GATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTCTT 639363 Query 195111 TCCTGTCAAAGTTTTTACGA 195130 || || | ||||| |||| Sbjct 639364 GCCAGTGAGGGTTTTGACGA 639383 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| || | || |||||| ||| || ||||| || ||||| | ||| || | || Sbjct 638722 TCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCC 638781 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| ||||||||||| || ||||| || || || || ||||| ||||| ||||| || Sbjct 638782 ATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTT 638841 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||| ||||| || ||||| ||||| ||||| || || || |||||||| || | Sbjct 638842 ATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGAT 638901 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||| |||||| ||||| | ||||| Sbjct 638902 AGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 100 bits (110), Expect = 6e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| || | || || | || ||||| Sbjct 639499 AACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGACAGGGTACGGCCGTCTTC 639558 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || ||||||||||| ||||| ||||| ||||| || ||||| ||||| || Sbjct 639559 CAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGGATACCTTCCTTGTCCTG 639618 Query 195051 AATTTTTTGCTTGAC 195065 ||||| |||||| Sbjct 639619 GATTTTGGACTTGAC 639633 >seq49 Length=1984306 Score = 113 bits (124), Expect = 1e-19 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || |||||||||||||| ||||| |||| ||| || | ||||| ||| Sbjct 95375 ACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCCTCG 95434 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||| || || |||||||| || ||||| ||||| || || || || ||||||||| Sbjct 95435 AGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCTTTGTCT 95491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480064754836