Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq75 109 4e-19
seq49 82.4 5e-11
>seq75
Length=1151455
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| |||| ||| ||||| ||||| || | ||||| || |||||||||||||| || |||
Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| || ||||| || || ||||| || || || ||||| ||| | ||
Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||| ||||| || || || ||| ||| | || | || | ||| ||
Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACT 638890
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | || || ||||| || || ||||| ||||| ||||||||||||
Sbjct 638891 TCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCATA 638938
Score = 84.2 bits (92), Expect = 1e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||| | |||| |||||| || || || ||||| || || |||| | || || |||||
Sbjct 638962 GTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTCCTCAAGCTG 639021
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
||||||||| || || ||||||||||||||| | || | || || || || ||| ||
Sbjct 639022 TTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTT 639081
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
||| ||| | || | || | || || || | || || ||||| || ||
Sbjct 639082 GCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCGGT 639141
Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981
|| ||||| || |||||||||||
Sbjct 639142 CAGGGTCTTAACGAAGATCTGCAT 639165
>seq49
Length=1984306
Score = 82.4 bits (90), Expect = 5e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
||||| |||||||| ||||| |||||| | || |||| || |||||||| ||||| ||
Sbjct 95393 TCTTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAG 95452
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| || ||||||||||| | || | ||||| |||||
Sbjct 95453 ATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCTTTGTC 95490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633172701024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |