Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq75 109 4e-19 seq49 82.4 5e-11 >seq75 Length=1151455 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||| ||| ||||| ||||| || | ||||| || |||||||||||||| || ||| Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| || || ||||| || || || ||||| ||| | || Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||| ||||| || || || ||| ||| | || | || | ||| || Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACT 638890 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || ||||| || || ||||| ||||| |||||||||||| Sbjct 638891 TCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCATA 638938 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||| | |||| |||||| || || || ||||| || || |||| | || || ||||| Sbjct 638962 GTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTCCTCAAGCTG 639021 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||||||| || || ||||||||||||||| | || | || || || || ||| || Sbjct 639022 TTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTT 639081 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||| ||| | || | || | || || || | || || ||||| || || Sbjct 639082 GCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCGGT 639141 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||||||||| Sbjct 639142 CAGGGTCTTAACGAAGATCTGCAT 639165 >seq49 Length=1984306 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| |||||||| ||||| |||||| | || |||| || |||||||| ||||| || Sbjct 95393 TCTTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAG 95452 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || ||||||||||| | || | ||||| ||||| Sbjct 95453 ATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCTTTGTC 95490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633172701024