Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq50 123 2e-22 seq75 118 9e-21 seq25 109 4e-18 >seq50 Length=1359123 Score = 123 bits (136), Expect = 2e-22 Identities = 321/484 (66%), Gaps = 4/484 (1%) Strand=Plus/Plus Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| |||||||| || || |||||| | || || || || | ||| | ||||| || Sbjct 181980 GAAATCATTGCCAACGACCAGGGTAACCGGACCACGCCCTCGTTCGTTGCCTTCACAGAC 182039 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 || || | | | | || ||||| ||||| |||||| | | || || | |||||| Sbjct 182040 ACAGAGCGTCTCATCGGCGATGCTGCAAAGAATCAAGTCGCCATGAACCCAAGCAATACA 182099 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 |||| || || || ||| | ||||| | | || ||| | || ||| | ||| Sbjct 182100 GTTTTCGACGCAAAGCGTCTCATTGGCCGCAAGTTCGCCGATGCTGAGGTCCAGTCTGAT 182159 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 |||||||||| || ||| | || || | ||| || ||| ||| | | | Sbjct 182160 ATGAAGCATTTCCCCTTCAAGATCATTGACAAGGGTGGCAAGCCTGTCATTCA-GATTGA 182218 Query 550295 CATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353 | |||| | || | || | || ||| |||| || || ||||| | | || Sbjct 182219 GTTCAAGGGCGAGACGAAGGAGTTCACTCCCGAAGAAATCTCCTCCATGGTCCTCACCAA 182278 Query 550354 AATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTG 550412 |||| | | || || ||| | | | ||||| || | | || || | |||| Sbjct 182279 GATGAGAGAGACTGCTGAGT-CATATCTTGGTGGCACCGTCAATAACGCCGTTGTCACTG 182337 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 | || || || || |||||||| ||||| |||||||| || |||||||| | ||||||| Sbjct 182338 TTCCCGCCTACTTCAATGACTCCCAACGCCAAGCTACCAAGGATGCTGGTCTCATTGCTG 182397 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532 | || ||||| || ||||| ||||| || |||||||||||||| |||| || || |||| Sbjct 182398 GTCTCAATGTCCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATTGCTTACGGCCTTG 182457 Query 550533 ATAA 550536 | || Sbjct 182458 ACAA 182461 >seq75 Length=1151455 Score = 118 bits (130), Expect = 9e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||| || || || |||||| |||||||| || | || |||| Sbjct 638948 AGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGG 639007 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 || ||||| ||||||||||| || || |||| |||||| || || || || |||||| Sbjct 639008 CCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCT 639067 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435 |||||||||||||| ||| || ||||| ||||| | | | || ||| ||||| Sbjct 639068 TTATCTTGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGAC-TTCAAGAGT 639126 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||||| || || || || |||||||| || ||||| Sbjct 639127 AATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 639165 >seq25 Length=1692869 Score = 109 bits (120), Expect = 4e-18 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || ||||| || |||||||||||||| ||||||||||| | ||| Sbjct 1403003 ACAGTCCCCGCCTACTTCAATGATTCCCAACGTCAAGCTACCAAAGATGCTGGTCAGATT 1403062 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| ||||| || || ||| || |||| || ||||| |||||||| ||||| || || Sbjct 1403063 GCTGGTCTTAACGTGCTCCGTGTTGTCAACGAGCCTACAGCTGCTGCTCTTGCCTACGGT 1403122 Query 550529 CTTGA 550533 || || Sbjct 1403123 CTCGA 1403127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029290288472920