Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq50 123 2e-22
seq75 118 9e-21
seq25 109 4e-18
>seq50
Length=1359123
Score = 123 bits (136), Expect = 2e-22
Identities = 321/484 (66%), Gaps = 4/484 (1%)
Strand=Plus/Plus
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
||||| |||||||| || || |||||| | || || || || | ||| | ||||| ||
Sbjct 181980 GAAATCATTGCCAACGACCAGGGTAACCGGACCACGCCCTCGTTCGTTGCCTTCACAGAC 182039
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174
|| || | | | | || ||||| ||||| |||||| | | || || | ||||||
Sbjct 182040 ACAGAGCGTCTCATCGGCGATGCTGCAAAGAATCAAGTCGCCATGAACCCAAGCAATACA 182099
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234
|||| || || || ||| | ||||| | | || ||| | || ||| | |||
Sbjct 182100 GTTTTCGACGCAAAGCGTCTCATTGGCCGCAAGTTCGCCGATGCTGAGGTCCAGTCTGAT 182159
Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294
|||||||||| || ||| | || || | ||| || ||| ||| | | |
Sbjct 182160 ATGAAGCATTTCCCCTTCAAGATCATTGACAAGGGTGGCAAGCCTGTCATTCA-GATTGA 182218
Query 550295 CATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353
| |||| | || | || | || ||| |||| || || ||||| | | ||
Sbjct 182219 GTTCAAGGGCGAGACGAAGGAGTTCACTCCCGAAGAAATCTCCTCCATGGTCCTCACCAA 182278
Query 550354 AATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTG 550412
|||| | | || || ||| | | | ||||| || | | || || | ||||
Sbjct 182279 GATGAGAGAGACTGCTGAGT-CATATCTTGGTGGCACCGTCAATAACGCCGTTGTCACTG 182337
Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472
| || || || || |||||||| ||||| |||||||| || |||||||| | |||||||
Sbjct 182338 TTCCCGCCTACTTCAATGACTCCCAACGCCAAGCTACCAAGGATGCTGGTCTCATTGCTG 182397
Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTG 550532
| || ||||| || ||||| ||||| || |||||||||||||| |||| || || ||||
Sbjct 182398 GTCTCAATGTCCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATTGCTTACGGCCTTG 182457
Query 550533 ATAA 550536
| ||
Sbjct 182458 ACAA 182461
>seq75
Length=1151455
Score = 118 bits (130), Expect = 9e-21
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
||||| || ||||| || || || |||||| |||||||| || | || ||||
Sbjct 638948 AGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGG 639007
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|| ||||| ||||||||||| || || |||| |||||| || || || || ||||||
Sbjct 639008 CCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCT 639067
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435
|||||||||||||| ||| || ||||| ||||| | | | || ||| |||||
Sbjct 639068 TTATCTTGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGAC-TTCAAGAGT 639126
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| ||||| || || || || |||||||| || |||||
Sbjct 639127 AATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 639165
>seq25
Length=1692869
Score = 109 bits (120), Expect = 4e-18
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
|| || || || || || ||||| || |||||||||||||| ||||||||||| | |||
Sbjct 1403003 ACAGTCCCCGCCTACTTCAATGATTCCCAACGTCAAGCTACCAAAGATGCTGGTCAGATT 1403062
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
||||| ||||| || || ||| || |||| || ||||| |||||||| ||||| || ||
Sbjct 1403063 GCTGGTCTTAACGTGCTCCGTGTTGTCAACGAGCCTACAGCTGCTGCTCTTGCCTACGGT 1403122
Query 550529 CTTGA 550533
|| ||
Sbjct 1403123 CTCGA 1403127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029290288472920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |