Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq73 138 2e-27 seq79 111 3e-19 >seq73 Length=4627324 Score = 138 bits (152), Expect = 2e-27 Identities = 346/520 (67%), Gaps = 17/520 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | || || |||||||| ||||| || ||| |||||||| || Sbjct 221308 CTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTGTC 221249 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| || ||||||| | |||||| || | ||| ||||| | || Sbjct 221248 CATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTT--GCCCAAAGCAACGAGG 221191 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| |||| |||||| |||| ||||||| ||||||| || |||||| || | || Sbjct 221190 AGGCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAAGC 221131 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | || || | ||| | || || ||||||| ||| || || ||||| | ||| Sbjct 221130 GCGACCGGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGATGATC 221071 Query 48077 TGCTTAACGCGGGACTCTGAG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 || || | |||| | || || |||| ||| | |||| | ||| Sbjct 221070 CTCTCGACA---GCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGA---AGAGGAGACAG 221017 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || || || |||| ||||| ||||| || || ||| |||| || || || ||| Sbjct 221016 GCGAAATCAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGCCA 220957 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| |||| | || | |||||| || | ||||| || ||| |||||||||| Sbjct 220956 GGCATGAGGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGATG 220897 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 || || || || ||||| ||| ||| | || | | || | | | ||| ||| |||| Sbjct 220896 CCTTCGACGGCAGCGAAGGCGACGAGACGCTGTGCAAAGGTGGACTCCTTATCTTCGATC 220837 Query 48314 CA--GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || ||| | ||||| || |||||||| |||||| || Sbjct 220836 CACCGGATA--GCCCAATCAGCCTTCTTGCGGATGCAGGG 220799 >seq79 Length=405269 Score = 111 bits (122), Expect = 3e-19 Identities = 276/417 (66%), Gaps = 9/417 (2%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 || ||||| || ||||| ||||| | || || | | | ||||| || || |||||| Sbjct 293050 GGATTGACAATTTGGAATTCACCCGCCAGAACACGGCGCGAGTAAATATTGGAGGTGTAG 293109 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || |||| || ||||||| |||||||||||| |||||||| || |||||||| || Sbjct 293110 GGTTCGAAGCACTCGTTGAACCCCAGAATCTGGCTGGTGCTGGCAGTAGGCATGGGCGCA 293169 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 || || | ||| || | ||||| |||| | || | || | ||||| Sbjct 293170 ACAAGCAAACTATTACGAACTCCATGCTTAGCAATATCTTGTTTCAG------CGAGTCC 293223 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || | |||| ||||| | | ||||||||||| ||| | || | |||||||| | Sbjct 293224 CA-ATCCCAG--AGGTCGGTGGGAGTGACGTTCCACATATCATATTGAAGGATGCCTTGG 293280 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || ||| || | || | |||||| ||||| | || |||| || || ||| Sbjct 293281 GAAACTGGGGAACCTTCATACGTGGAGTATGGGCCGTCAATTTTAGCCAATTCACAAGAC 293340 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || || | |||| |||||| ||||| || || | |||| | || ||| ||||| Sbjct 293341 GCAGTCAAACCCGCGTGGTAGATTGTTTCGAAAATTTGAATGTTCAACTGCTTAGCCTCG 293400 Query 213267 GGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 ||||| ||| || | | || |||| ||||||| || |||||||| ||| Sbjct 293401 GGGGAATCGAATGGAAGCCGCAAAGCAAGGAAAGCATCAGCAAGACCCTGGACACCG 293457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531542430720