Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq50 132 3e-25
seq75 107 1e-17
seq25 86.0 4e-11
>seq50
Length=1359123
Score = 132 bits (146), Expect = 3e-25
Identities = 325/488 (67%), Gaps = 6/488 (1%)
Strand=Plus/Plus
Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451
||||| |||||||| ||||| ||||| | || || || || | ||| | || || ||
Sbjct 181980 GAAATCATTGCCAACGACCAGGGTAACCGGACCACGCCCTCGTTCGTTGCCTTCACAGAC 182039
Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511
|| || | ||| || || |||||||| || |||||| || || || |||||
Sbjct 182040 ACAGAGCGTCTCATCGGCGATGCTGCAAAGAATCAAGTCGCCATGAACCCAAGCAATACA 182099
Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571
|||| || || || | | ||||| || || || | ||| | ||||| ||||||
Sbjct 182100 GTTTTCGACGCAAAGCGTCTCATTGGCCGCAAGTTCGCCGATGCTGAGGTCCAGTCTGAT 182159
Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AGAAGCAA 474629
||| |||| || || ||| | || | ||||| || || || ||| |
Sbjct 182160 ATGAAGCATTTCCCCTTCAAGATCATTGACAAGGGTGGCAAGCCTGTCATTCAGATTGAG 182219
Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689
| || | || || || || | || | || ||| |||| || || ||||| | |||
Sbjct 182220 TTCAAG--GGCGAGACGAAGGAGTTCACTCCCGAAGAAATCTCCTCCATGGTCCTCACCA 182277
Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748
| |||| | | || || ||| ||||||||||| || | | | || || | |||
Sbjct 182278 AGATGAGAGAGACTGCTGAG-TCATATCTTGGTGGCACCGTCAATAACGCCGTTGTCACT 182336
Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808
||||| || || || ||||| || ||||| ||||| || || ||||| || |||||
Sbjct 182337 GTTCCCGCCTACTTCAATGACTCCCAACGCCAAGCTACCAAGGATGCTGGTCTCATTGCT 182396
Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868
||||| ||||| | ||||| || || || || || || || || ||||||| || |||
Sbjct 182397 GGTCTCAATGTCCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATTGCTTACGGCCTT 182456
Query 474869 GATAAGAA 474876
|| |||||
Sbjct 182457 GACAAGAA 182464
>seq75
Length=1151455
Score = 107 bits (118), Expect = 1e-17
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| || ||||| || ||||| |||||| | ||| || || | || ||
Sbjct 638944 ACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGT 639003
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | || ||||| || ||||| || || || || ||||| || || || || || ||
Sbjct 639004 TCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACC 639063
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
||| || |||||||| || ||| || ||||| ||||| | | | ||||||
Sbjct 639064 TTCTTTATCTTGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAG 639123
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| ||||| ||||| || ||||||||||| || ||
Sbjct 639124 AGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTG 639162
Score = 87.8 bits (96), Expect = 1e-11
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
||||| |||||||| ||||| || ||||| ||||| || |||||||| || |||||||||
Sbjct 639554 TCTTCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGGATACCTTCCTTG 639613
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || || ||||| || || |||||||||
Sbjct 639614 TCCTGGATTTTGGACTTGACTGCGTCGATAGTATCA 639649
>seq25
Length=1692869
Score = 86.0 bits (94), Expect = 4e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805
|| || || || || || |||||||| ||||||||||| || |||||||| || |||
Sbjct 1403003 ACAGTCCCCGCCTACTTCAATGATTCCCAACGTCAAGCTACCAAAGATGCTGGTCAGATT 1403062
Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865
|| |||||||| || | ||| || | || || || ||||| || || ||||| || |||
Sbjct 1403063 GCTGGTCTTAACGTGCTCCGTGTTGTCAACGAGCCTACAGCTGCTGCTCTTGCCTACGGT 1403122
Query 474866 CTTGA 474870
|| ||
Sbjct 1403123 CTCGA 1403127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268174567355984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |