Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq27 113 5e-20
seq79 104 3e-17
>seq27
Length=845112
Score = 113 bits (124), Expect = 5e-20
Identities = 281/418 (67%), Gaps = 29/418 (7%)
Strand=Plus/Minus
Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334
|||||||||||||||||||||||| | || | || || ||||| || ||||| |
Sbjct 463755 TGGTGCCAAGATCCCCCGAGGCGCTATCCTTTCTGGGCCACCGGGTACCGGTAAGACATT 463696
Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATT---CATCCAGTGCTCTGCCGC 175391
|| || ||| | || || || || ||| || || || | | || | |||
Sbjct 463695 ACTGGCAAAAGCTACAGCTGGCGAGTCGGGTGTTCCGTTTTACAGCGTGAGCGGTTCCGA 463636
Query 175392 AAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAAT 175451
| || || || ||||| |||||||| || | | ||||||||||| |||| |
Sbjct 463635 A---TTCGTCGAAATGTTCGTTGGTGTTGGGCCTTCCCGAGTTCGCGATCTATTTGCCAC 463579
Query 175452 CGCCCGCGAAAATCAACCAT-GTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG- 175509
|| || ||||| || || | ||||| | |||||||||||||||||||| | || |||
Sbjct 463578 TGCTCG-GAAAAACACCCCTTGTATTATATTCATTGATGAGATTGATGCTATTGGGAAGT 463520
Query 175510 CAACG-----CAGCGC---TGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTA 175561
| | | | ||| ||||||| | ||| |||||| | ||| || | |
Sbjct 463519 CGAGGTCGAAAAACGCTTATGGTGGT------GGAAACGACGAGCGGGAAAGCACGCTGA 463466
Query 175562 ATCAACTACTCACCGAGATGGATGGCTTTGACA---ATGAGACTGGCATTGTGGTTATTG 175618
||||| | ||||| || ||||||||||| ||| ||| || | |||| ||| | |
Sbjct 463465 ATCAAATTCTCACAGAAATGGATGGCTTCAACACTTCTGA-ACAAG--TTGTCGTTCTGG 463409
Query 175619 CGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGA 175676
| | || ||||| || |||||||||||| | || || || || || || || |||||
Sbjct 463408 CTGGAACAAATCGAGTTGATATCCTTGATAAGGCACTGCTGCGACCTGGCCGATTTGA 463351
>seq79
Length=405269
Score = 104 bits (114), Expect = 3e-17
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935
||||| | |||||||| || | || || |||||||| | |||| ||||||||||||||
Sbjct 293803 TTTGGTATGCTATTCTTGAAGCTCAAACTGAGACTGGTAACCCATTTATGCTTTACAAGG 293744
Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995
| || || ||||||||||| || |||||||| | || ||||| | ||||| || || |
Sbjct 293743 ACGCGTGCAACAAGAAGAGCAATCAAAAGAACCTCGGCACAATTAGAAGCTCTAACCTAT 293684
Query 75996 GCACGGAAAT 76005
|||| || ||
Sbjct 293683 GCACTGAGAT 293674
Score = 102 bits (112), Expect = 1e-16
Identities = 399/627 (64%), Gaps = 9/627 (1%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| || ||||| ||||||| || || |||| || ||||| || || | || ||
Sbjct 294535 CCCCCAACACATGATCATGCGTGTTGCTGTCGGAATTCACGGAGACGATGTAGAGAAAGT 294476
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| | || ||||| || ||||| ||| | |||| || || | || ||||| ||
Sbjct 294475 CATCGAAACATATAACCTCATGTCTCAAAAATTCTTCACGCATGCTTCTCCTACCCTTTT 294416
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
|||||||||||| || ||| |||||| | ||||||||||||| || ||||||||
Sbjct 294415 CAATGCTGGTACCCCGCAACCTCAGATGGCTTCGTGCTTCCTTATCGACATGAAGGAGGA 294356
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| ||| | ||||| || | || | | | ||||| || |||||| |||||
Sbjct 294355 CAGTATCGAGGGTATTTACGACACGTTGAAGACTTGTGCCTTGATTTCAAAGACTGCTGG 294296
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
|||||||| | |||| || | | | || | ||| ||| || || ||
Sbjct 294295 TGGTATTGGCCTCAACATTCACCGCATTCGTGGCACTGGTTCTTACATTGCCGGAACGAA 294236
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
||| || | || || |||| ||||| || || || ||| ||| || | |||||
Sbjct 294235 TGGCTCCTCCAACGGAATCGTTCCCATGCTGCGAGTTTTCAACAACACTGCTAGATATGT 294176
Query 75571 AAATCAAGCGGGGCGTCGCAA------GGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624
| || ||| || ||| ||| | |||| | ||| | || || |||||
Sbjct 294175 CGACCA---GGGAGGTAACAAGCGGCCGGGAGCTTTCGCTATTTACCTTGAGCCGTGGCA 294119
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
|||||||| | || ||| | || | || ||||| || | || || | ||||
Sbjct 294118 CACCGATATCTTCGAATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGAAGTTCGGGC 294059
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| | |||||||| | || |||| || || || || ||||| || |||||| |
Sbjct 294058 TCGCGATCTCTTCCTGGCTCTCTGGACACCCGATCTGTTTATGAAACGTGTTGAGAAAAA 293999
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804
||| ||||| |||| || || || | | || ||||| | | || | || ||
Sbjct 293998 TGGCGAATGGACTCTCTTTTGCCCCAATGAAGCCCCAGGCTTGGCGGATGTCTATGGCGA 293939
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTA 75831
|||||||| || || ||| |||||
Sbjct 293938 CGAGTTTGAGGCTCTTTACGAGAAGTA 293912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568794631040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |