Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq27 113 5e-20 seq79 104 3e-17 >seq27 Length=845112 Score = 113 bits (124), Expect = 5e-20 Identities = 281/418 (67%), Gaps = 29/418 (7%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||||||||||||||||||||| | || | || || ||||| || ||||| | Sbjct 463755 TGGTGCCAAGATCCCCCGAGGCGCTATCCTTTCTGGGCCACCGGGTACCGGTAAGACATT 463696 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATT---CATCCAGTGCTCTGCCGC 175391 || || ||| | || || || || ||| || || || | | || | ||| Sbjct 463695 ACTGGCAAAAGCTACAGCTGGCGAGTCGGGTGTTCCGTTTTACAGCGTGAGCGGTTCCGA 463636 Query 175392 AAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAAT 175451 | || || || ||||| |||||||| || | | ||||||||||| |||| | Sbjct 463635 A---TTCGTCGAAATGTTCGTTGGTGTTGGGCCTTCCCGAGTTCGCGATCTATTTGCCAC 463579 Query 175452 CGCCCGCGAAAATCAACCAT-GTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG- 175509 || || ||||| || || | ||||| | |||||||||||||||||||| | || ||| Sbjct 463578 TGCTCG-GAAAAACACCCCTTGTATTATATTCATTGATGAGATTGATGCTATTGGGAAGT 463520 Query 175510 CAACG-----CAGCGC---TGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTA 175561 | | | | ||| ||||||| | ||| |||||| | ||| || | | Sbjct 463519 CGAGGTCGAAAAACGCTTATGGTGGT------GGAAACGACGAGCGGGAAAGCACGCTGA 463466 Query 175562 ATCAACTACTCACCGAGATGGATGGCTTTGACA---ATGAGACTGGCATTGTGGTTATTG 175618 ||||| | ||||| || ||||||||||| ||| ||| || | |||| ||| | | Sbjct 463465 ATCAAATTCTCACAGAAATGGATGGCTTCAACACTTCTGA-ACAAG--TTGTCGTTCTGG 463409 Query 175619 CGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGA 175676 | | || ||||| || |||||||||||| | || || || || || || || ||||| Sbjct 463408 CTGGAACAAATCGAGTTGATATCCTTGATAAGGCACTGCTGCGACCTGGCCGATTTGA 463351 >seq79 Length=405269 Score = 104 bits (114), Expect = 3e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | |||||||| || | || || |||||||| | |||| |||||||||||||| Sbjct 293803 TTTGGTATGCTATTCTTGAAGCTCAAACTGAGACTGGTAACCCATTTATGCTTTACAAGG 293744 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 | || || ||||||||||| || |||||||| | || ||||| | ||||| || || | Sbjct 293743 ACGCGTGCAACAAGAAGAGCAATCAAAAGAACCTCGGCACAATTAGAAGCTCTAACCTAT 293684 Query 75996 GCACGGAAAT 76005 |||| || || Sbjct 293683 GCACTGAGAT 293674 Score = 102 bits (112), Expect = 1e-16 Identities = 399/627 (64%), Gaps = 9/627 (1%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| || || |||| || ||||| || || | || || Sbjct 294535 CCCCCAACACATGATCATGCGTGTTGCTGTCGGAATTCACGGAGACGATGTAGAGAAAGT 294476 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | | || ||||| || ||||| ||| | |||| || || | || ||||| || Sbjct 294475 CATCGAAACATATAACCTCATGTCTCAAAAATTCTTCACGCATGCTTCTCCTACCCTTTT 294416 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||||||||| || ||| |||||| | ||||||||||||| || |||||||| Sbjct 294415 CAATGCTGGTACCCCGCAACCTCAGATGGCTTCGTGCTTCCTTATCGACATGAAGGAGGA 294356 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | ||||| || | || | | | ||||| || |||||| ||||| Sbjct 294355 CAGTATCGAGGGTATTTACGACACGTTGAAGACTTGTGCCTTGATTTCAAAGACTGCTGG 294296 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | |||| || | | | || | ||| ||| || || || Sbjct 294295 TGGTATTGGCCTCAACATTCACCGCATTCGTGGCACTGGTTCTTACATTGCCGGAACGAA 294236 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || | || || |||| ||||| || || || ||| ||| || | ||||| Sbjct 294235 TGGCTCCTCCAACGGAATCGTTCCCATGCTGCGAGTTTTCAACAACACTGCTAGATATGT 294176 Query 75571 AAATCAAGCGGGGCGTCGCAA------GGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624 | || ||| || ||| ||| | |||| | ||| | || || ||||| Sbjct 294175 CGACCA---GGGAGGTAACAAGCGGCCGGGAGCTTTCGCTATTTACCTTGAGCCGTGGCA 294119 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 |||||||| | || ||| | || | || ||||| || | || || | |||| Sbjct 294118 CACCGATATCTTCGAATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGAAGTTCGGGC 294059 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | |||||||| | || |||| || || || || ||||| || |||||| | Sbjct 294058 TCGCGATCTCTTCCTGGCTCTCTGGACACCCGATCTGTTTATGAAACGTGTTGAGAAAAA 293999 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| ||||| |||| || || || | | || ||||| | | || | || || Sbjct 293998 TGGCGAATGGACTCTCTTTTGCCCCAATGAAGCCCCAGGCTTGGCGGATGTCTATGGCGA 293939 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTA 75831 |||||||| || || ||| ||||| Sbjct 293938 CGAGTTTGAGGCTCTTTACGAGAAGTA 293912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568794631040