Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq75 109 8e-19
>seq75
Length=1151455
Score = 109 bits (120), Expect = 8e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | ||||| |||| || |||||||| ||| | |||||||| ||
Sbjct 638937 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAAACTATCACACTTGAAGTCGAGAGCTCC 638878
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| |||| ||||| |||||||| ||||| || || ||||| ||
Sbjct 638877 GACACAATTGATAACGTAAAAAGCAAAATCCAAGATAAGGAAGGGATTCCACCAGATCAG 638818
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | || | ||| ||||||||||| |||||| | | || | || ||||||||
Sbjct 638817 CAGCGTCTCATCTTTGCTGGTAAGCAGCTAGAAGATGGCCGGACGCTTTCTGATTATAAC 638758
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040
|| || ||| || || ||||| ||||| |||||
Sbjct 638757 ATTCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGATT 638720
Score = 109 bits (120), Expect = 8e-19
Identities = 131/177 (74%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
||||| | ||||| || |||||||| || || || ||| ||| |||| || |||
Sbjct 639378 AAAACCCTCACTGGCAAGACTATTACCTTGGAGGTGGAATCTTCGGATACCATCGACAAC 639319
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
|| || | ||||| || |||||||||||||| || ||||| || ||| | ||||| |
Sbjct 639318 GTAAAGAGCAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCAGCAACGTTTGATCTTC 639259
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAG 156014
|| || ||||||||||||||| | | || || || ||||||| | ||||||| ||
Sbjct 639258 GCTGGAAAGCAGCTCGAAGATGGCCGTACCTTGTCCGATTATA--ACATCCAAAAAG 639204
Score = 107 bits (118), Expect = 3e-18
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || || |||| || |||| || ||||| ||||| | ||||||||| ||
Sbjct 639166 AATGCAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAAAGCTC 639107
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| ||| ||||| |||| ||||| |||||||||||||| || || ||||| ||
Sbjct 639106 AGATACCATTGACAACGTTAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCAGACCA 639047
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || | || | ||||| || ||||| || || | |||| | ||||| || |
Sbjct 639046 GCAACGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTACA- 638988
Query 156002 TATATCCAAAGAG 156014
||||||||| ||
Sbjct 638987 -ATATCCAAAAAG 638976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871011972800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |