Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq75 114 3e-20 >seq75 Length=1151455 Score = 114 bits (126), Expect = 3e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || | || | || | ||||| |||||| || || Sbjct 638936 ATACCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCT 638995 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||||| | || || | ||||| || || ||||| | || || || || ||| Sbjct 638996 GAGAGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGT 639055 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| |||| || || || | |||||| ||| Sbjct 639056 GGGATACCTTCTTTATCTTGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCG 639115 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| |||||||| ||||| || || | || |||| || ||||||||| Sbjct 639116 ACTTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 104 bits (114), Expect = 5e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || ||||||||||| | || || |||| || | || |||||||||||||| | | | Sbjct 638756 ATGTTATAATCAGAAAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGC 638815 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| ||||| || ||||| |||||||| ||||| ||||||| ||| || | Sbjct 638816 TGCTGATCTGGTGGAATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTG 638875 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || || ||||| || || || ||||| || || | ||||| | || |||||| Sbjct 638876 TCGGAGCTCTCGACTTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGC 638935 Query 192535 AT 192536 || Sbjct 638936 AT 638937 Score = 84.2 bits (92), Expect = 4e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| ||| |||||||| || || || || |||| || | || || ||||| ||| Sbjct 639203 TCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAG 639262 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 || || | || || || || || || ||||||||||| || ||||| | ||||| || Sbjct 639263 ATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATTTTGCTCTTTACGTTG 639322 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521 || | ||| || ||||| || || | ||||| || || ||||| | ||||| Sbjct 639323 TCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTT 639378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984478637725800