Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq75 114 3e-20
>seq75
Length=1151455
Score = 114 bits (126), Expect = 3e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || | || | || | ||||| |||||| || ||
Sbjct 638936 ATACCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCT 638995
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||||| | || || | ||||| || || ||||| | || || || || |||
Sbjct 638996 GAGAGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGT 639055
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||||||||| ||||| |||| || || || | |||||| |||
Sbjct 639056 GGGATACCTTCTTTATCTTGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCG 639115
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| |||||||| ||||| || || | || |||| || |||||||||
Sbjct 639116 ACTTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166
Score = 104 bits (114), Expect = 5e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
|| ||||||||||| | || || |||| || | || |||||||||||||| | | |
Sbjct 638756 ATGTTATAATCAGAAAGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGC 638815
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
|| ||||| ||||| || ||||| |||||||| ||||| ||||||| ||| || |
Sbjct 638816 TGCTGATCTGGTGGAATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTG 638875
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
|| || || ||||| || || || ||||| || || | ||||| | || ||||||
Sbjct 638876 TCGGAGCTCTCGACTTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGC 638935
Query 192535 AT 192536
||
Sbjct 638936 AT 638937
Score = 84.2 bits (92), Expect = 4e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405
||||| ||| |||||||| || || || || |||| || | || || ||||| |||
Sbjct 639203 TCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAG 639262
Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465
|| || | || || || || || || ||||||||||| || ||||| | ||||| ||
Sbjct 639263 ATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATTTTGCTCTTTACGTTG 639322
Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|| | ||| || ||||| || || | ||||| || || ||||| | |||||
Sbjct 639323 TCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTT 639378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984478637725800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |