Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq32 123 7e-23 seq79 114 4e-20 >seq32 Length=920050 Score = 123 bits (136), Expect = 7e-23 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 || |||||||| |||||| || || || |||||||||||||| ||||| |||||||| Sbjct 392069 CGTTGAATATATCCAGTTTCAGCAGTCTTGACAGCTGTATCAATAAGACCCTCACGACCA 392128 Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACG 302715 |||||||||||||||| | || || || || | | | | || |||||||| Sbjct 392129 GCCATAGCATGGAAGAAAAATTCAGTAGGGGTGAGACCACGGAGATACGAATTCTCAACG 392188 Query 302716 AAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCA 302775 || || || | ||| ||||||| || |||||| |||||||||| ||| | | | Sbjct 392189 AAGCCGCGAGACTCAGGCGAATAATCATCCTTGGTGAAGTGTGGCAAGGTACGATATTTG 392248 Query 302776 TAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGC 302835 | ||| |||| ||||| || || |||||| ||||| || | | | |||| || Sbjct 392249 AAACCGAATGGTATACGTTTCCCTTCAACGGATTGCTGGCCAACAACAGCAGTCATTTGG 392308 Query 302836 GAAATATT 302843 |||||||| Sbjct 392309 GAAATATT 392316 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| |||||||| ||||||||| Sbjct 391271 AGAATTTCCTTCAGACGAGGCACACCAAGGGTAACGTT---CTTGGACGAGACACCAGCA 391327 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||||||||||| || | || || | ||||| ||||| |||||| || | Sbjct 391328 AAATGGAAAGTATTCAAGGTCATCTGTGTTGCCGGCTCTCCAATTGATTGTGCAGCCAAG 391387 Query 301933 ATACCAACCATTTCTCCTGG 301952 | ||| |||||||| || || Sbjct 391388 ACACCGACCATTTCACCGGG 391407 >seq79 Length=405269 Score = 114 bits (126), Expect = 4e-20 Identities = 348/535 (65%), Gaps = 7/535 (1%) Strand=Plus/Plus Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029 ||||| | ||||| ||||| || || || |||||||| ||||| | || ||| Sbjct 294068 TCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGC 294127 Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086 || || || ||||| ||| || || |||| || ||||| || ||||| | |||| Sbjct 294128 TCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCCTGGTCGACATATCTAGCA 294187 Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146 || || ||||| || | ||||| |||| || || ||||| | |||||| |||||| | Sbjct 294188 GTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCA 294247 Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206 || | ||||||| |||| ||||| | || ||||||||||| | || Sbjct 294248 ATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTT 294307 Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA-- 156264 ||||| || || ||| | || | | ||||||| || ||| || || | || Sbjct 294308 GAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCGATACTGTCCTCCTTCATG 294367 Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324 | |||| || |||||||| | |||||| | || || ||||| ||||| || |||| Sbjct 294368 TCGATA--AGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAG 294425 Query 156325 GTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA 156384 | | ||||| | || | || | |||||| | ||||| || | | ||||| | Sbjct 294426 GAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTTTCGATGACTTTCTCTA 294485 Query 156385 GATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444 || |||||||| | || || || | ||| ||| || || || || || ||| Sbjct 294486 CATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGTTGGGGGCGTTCAGCAA 294545 Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || | ||||| || | || | || |||| ||| || || ||||| || Sbjct 294546 CTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTGAATCCGAAGTA 294600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815563372396