Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq32 123 7e-23
seq79 114 4e-20
>seq32
Length=920050
Score = 123 bits (136), Expect = 7e-23
Identities = 176/248 (71%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655
|| |||||||| |||||| || || || |||||||||||||| ||||| ||||||||
Sbjct 392069 CGTTGAATATATCCAGTTTCAGCAGTCTTGACAGCTGTATCAATAAGACCCTCACGACCA 392128
Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACG 302715
|||||||||||||||| | || || || || | | | | || ||||||||
Sbjct 392129 GCCATAGCATGGAAGAAAAATTCAGTAGGGGTGAGACCACGGAGATACGAATTCTCAACG 392188
Query 302716 AAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCA 302775
|| || || | ||| ||||||| || |||||| |||||||||| ||| | | |
Sbjct 392189 AAGCCGCGAGACTCAGGCGAATAATCATCCTTGGTGAAGTGTGGCAAGGTACGATATTTG 392248
Query 302776 TAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGC 302835
| ||| |||| ||||| || || |||||| ||||| || | | | |||| ||
Sbjct 392249 AAACCGAATGGTATACGTTTCCCTTCAACGGATTGCTGGCCAACAACAGCAGTCATTTGG 392308
Query 302836 GAAATATT 302843
||||||||
Sbjct 392309 GAAATATT 392316
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| |||| ||||| |||||||| |||||||||
Sbjct 391271 AGAATTTCCTTCAGACGAGGCACACCAAGGGTAACGTT---CTTGGACGAGACACCAGCA 391327
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||||||||||| || | || || | ||||| ||||| |||||| || |
Sbjct 391328 AAATGGAAAGTATTCAAGGTCATCTGTGTTGCCGGCTCTCCAATTGATTGTGCAGCCAAG 391387
Query 301933 ATACCAACCATTTCTCCTGG 301952
| ||| |||||||| || ||
Sbjct 391388 ACACCGACCATTTCACCGGG 391407
>seq79
Length=405269
Score = 114 bits (126), Expect = 4e-20
Identities = 348/535 (65%), Gaps = 7/535 (1%)
Strand=Plus/Plus
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
||||| | ||||| ||||| || || || |||||||| ||||| | || |||
Sbjct 294068 TCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGC 294127
Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086
|| || || ||||| ||| || || |||| || ||||| || ||||| | ||||
Sbjct 294128 TCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCCTGGTCGACATATCTAGCA 294187
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| || ||||| || | ||||| |||| || || ||||| | |||||| |||||| |
Sbjct 294188 GTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCA 294247
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206
|| | ||||||| |||| ||||| | || ||||||||||| | ||
Sbjct 294248 ATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTT 294307
Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA-- 156264
||||| || || ||| | || | | ||||||| || ||| || || | ||
Sbjct 294308 GAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCGATACTGTCCTCCTTCATG 294367
Query 156265 TTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAG 156324
| |||| || |||||||| | |||||| | || || ||||| ||||| || ||||
Sbjct 294368 TCGATA--AGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAG 294425
Query 156325 GTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAA 156384
| | ||||| | || | || | |||||| | ||||| || | | ||||| |
Sbjct 294426 GAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTTTCGATGACTTTCTCTA 294485
Query 156385 GATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444
|| |||||||| | || || || | ||| ||| || || || || || |||
Sbjct 294486 CATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGTTGGGGGCGTTCAGCAA 294545
Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| | ||||| || | || | || |||| ||| || || ||||| ||
Sbjct 294546 CTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTGAATCCGAAGTA 294600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471815563372396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |