Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq73 118 1e-20
>seq73
Length=4627324
Score = 118 bits (130), Expect = 1e-20
Identities = 91/108 (84%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||||| ||||||||| | || |||||| | || |||||| | || || ||
Sbjct 3051784 GCCGCCAACTACCTAGACATCAAGGCCCTTCTCGATATCGGTTGCAAGACCGTCGCAAAT 3051843
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293
||||||||||||||||| || ||||| ||||||||||| || ||||||
Sbjct 3051844 ATGATCAAGGGCAAGTCCCCGGAGGATATCCGCAAGACTTTCAACATC 3051891
Score = 89.7 bits (98), Expect = 6e-12
Identities = 169/246 (69%), Gaps = 6/246 (2%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| ||||| || ||| ||||| |||||||||||||| | || |||||
Sbjct 221313 GCCTTCTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATG 221254
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAG---TGCTTTTCGCATCCGAGCGAC 868807
||||| | || ||||||| | || ||| | ||| | || | ||| ||
Sbjct 221253 TTGTCCATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCC-CAAAGCAAC 221195
Query 868808 GCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCG 868867
| || ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| ||
Sbjct 221194 G--AGGAGGCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCA 221137
Query 868868 ATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACG 868927
| ||||| ||||| || | || | ||||| | |||||| ||| || || |
Sbjct 221136 AGAAGCGCGACCGGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTG 221077
Query 868928 ATGATC 868933
||||||
Sbjct 221076 ATGATC 221071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107130337014236
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |