Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq75 145 7e-30 seq49 95.1 1e-14 >seq75 Length=1151455 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || ||||| |||||||| || || ||||| || | || Sbjct 638937 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAAACTATCACACTTGAAGTCGAGAGCTCC 638878 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | |||||| || |||||||| || ||||| || || || ||||| Sbjct 638877 GACACAATTGATAACGTAAAAAGCAAAATCCAAGATAAGGAAGGGATTCCACCAGATCAG 638818 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||||| || ||| | | | || ||||||||| Sbjct 638817 CAGCGTCTCATCTTTGCTGGTAAGCAGCTAGAAGATGGCCGGACGCTTTCTGATTATAAC 638758 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || || || ||||||||| ||||||| || ||| Sbjct 638757 ATTCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGATTGCGGGGTGGC 638710 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || ||||| ||||| ||||| || ||||| ||| | | Sbjct 639165 ATGCAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAAAGCTCA 639106 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||||| ||| || ||||| |||||||| || || || || || Sbjct 639105 GATACCATTGACAACGTTAAAAGCAAA-ATTCAAGATAAAGAAGGTATCCCACCAGACCA 639047 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||| | ||||| ||||| |||||||| ||||| ||| | ||||| || || Sbjct 639046 GCAACGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTACAA 638987 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 || ||||| ||||| ||||| ||| Sbjct 638986 TATCCAAAAAGAATCCACACTCCAC 638962 Score = 102 bits (112), Expect = 7e-17 Identities = 139/193 (72%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| || || || || |||||||| | || || ||| | | || || | || | Sbjct 639378 AAAACCCTCACTGGCAAGACTATTACCTTGGAGGTGGAATCTTCGGATACCATCGACAAC 639319 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 ||||| || ||||| || |||||||| || || || || || |||||||||||||| Sbjct 639318 GTAAAGAGCAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCAGCAACGTTTGATCTTC 639259 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || ||||| || ||| | | | |||| ||||||||||| ||||| ||||| Sbjct 639258 GCTGGAAAGCAGCTCGAAGATGGCCGTACCTTGTCCGATTATAACATCCAAAAAGAATCC 639199 Query 24899 ACACTACA-CTTG 24910 || || || |||| Sbjct 639198 ACCCTCCATCTTG 639186 >seq49 Length=1984306 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 24796 AGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGA 24855 ||||||||| ||||| || ||||| || ||||| ||||||| ||||| |||||||| || Sbjct 95491 AGACAAAGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAACAGCTCGA 95432 Query 24856 GGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 |||| | | | | || || || ||||||||||| || ||||| || ||| | || | Sbjct 95431 GGATGGCCGTACCCTTTCCGACTACAACATTCAAAAAGAGTCGACCCTTCACCTCGTCCT 95372 Query 24916 GCGATTGCGCGGAGG 24930 ||| |||| || || Sbjct 95371 GCGTCTGCGTGGTGG 95357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896992638240