Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq73 131 3e-24
seq79 89.7 8e-12
seq52 89.7 8e-12
>seq73
Length=4627324
Score = 131 bits (144), Expect = 3e-24
Identities = 322/474 (68%), Gaps = 16/474 (3%)
Strand=Plus/Minus
Query 2411501 GCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGT 2411560
|||| | ||||||||||| ||||| || |||||||||||| || ||||| || | |
Sbjct 1434935 GCGCCAGCGCAAAGATCTTCCGCTGATCCACCCCGCCAAACTGCGCATCGACATCCAAAT 1434876
Query 2411561 GCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTG--AGCGGCGGGTTGCG 2411618
||| ||| || | ||||||||||||||||| | || ||| ||||||| |||
Sbjct 1434875 GCTCCTCATCCAACGCCTGCATGAGCGGGTAAATCAG--ACCTGAAAGCGGCGCATTGTC 1434818
Query 2411619 GTCCATCTTGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACG-CGCGC 2411675
|| ||| || |||| ||| | ||||||| ||| | ||| |||||||| |||
Sbjct 1434817 AACCTGCTTCACAACCTCCGCGCCAGCCTTTTTCGCATCATGC--TCGGTCACGACGCTG 1434760
Query 2411676 CGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCAC 2411735
| | ||||| || ||||| | ||||| |||| | ||||| ||||||||| | ||
Sbjct 1434759 C-TGAGGCGGAATAGGTCCATGGTGTATTTGGCGGAGAGTTGGTAGTCGCTGCCGAGGAC 1434701
Query 2411736 AAATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTC 2411795
|| ||||| ||| | |||||| ||| | ||| | ||| ||||| || |
Sbjct 1434700 GAACTCGAGTTTATCGATGGGGACGTGGATGGCTTCGAGGAGGGCGGTGATGACATAGCG 1434641
Query 2411796 GTACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGG 2411854
||| | |||| ||| | ||||||||| || | ||| || |||||| |
Sbjct 1434640 GTAGTATTTGGCA-CGGAAGTTGACGAGGTCGATGGGTGCTTTGAGGTTATCGAGGAAGC 1434582
Query 2411855 CGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTT 2411914
|||| | ||| || | |||||| | || | || || || |||| || | ||| ||||
Sbjct 1434581 CGTGGATGTCTGCGAGGAGGATTTTGACATGGCAGCCCGCGCGGAGGAAATGGGCGAGTT 1434522
Query 2411915 TAAAGATGGGCACA-AAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCC 2411966
| | ||| || ||| |||||||| ||| || || ||| || | ||||||||
Sbjct 1434521 TTACGATTGG-ACAGAAGTAGCCGCAG-TGTGGGCGGCCGGTTGTTGCGGTGCC 1434470
Score = 123 bits (136), Expect = 4e-22
Identities = 92/108 (85%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|||||||||||||| ||||||||| |||| |||||| | || ||||||||||| || ||
Sbjct 3051784 GCCGCCAACTACCTAGACATCAAGGCCCTTCTCGATATCGGTTGCAAGACCGTCGCAAAT 3051843
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754
| |||||||||||||| || ||||| ||||||||||| || ||||||
Sbjct 3051844 ATGATCAAGGGCAAGTCCCCGGAGGATATCCGCAAGACTTTCAACATC 3051891
Score = 93.3 bits (102), Expect = 7e-13
Identities = 177/256 (69%), Gaps = 10/256 (4%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||||| || ||| ||||| |||||||||||||| | |
Sbjct 221321 TGACACCGGCCTTCTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCA 221262
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAG---TGCTTCTCGCACC 794007
| ||||| ||||| | || ||||||| | ||| | ||| | || ||
Sbjct 221261 GGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGC-CC 221203
Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067
||| ||| || ||||| || |||||||| |||||||| ||||||||||| |||||
Sbjct 221202 AAAGCAACG--AGGAGGCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGT 221145
Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA--AACTCTTTCTCGATCTCGAC 794125
|||| || | ||||| || || || | | |||| | ||||| | |||||| |||
Sbjct 221144 TCATTCCAAGAAGCGCGACCGGGAGAGCAT--CTGAAAGGAACTCCTGCTCGATAGTGAC 221087
Query 794126 GGCCTCGATGATGATC 794141
|| || ||||||||
Sbjct 221086 AGCTTCAGTGATGATC 221071
Score = 89.7 bits (98), Expect = 8e-12
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|| ||||||| || |||||||||||||| ||||||||||| ||||| || ||||| ||
Sbjct 220701 GGCTCCTTGATATATGTGTCGATGAGGAGGGAGTAGGTCTCAGAGTGAATATTTTCCATC 220642
Query 794644 GCGATCTGGAAGCCATAAAAGCAG 794667
|||||||||||| || ||||||
Sbjct 220641 ATGATCTGGAAGCCGTAGAAGCAG 220618
>seq79
Length=405269
Score = 89.7 bits (98), Expect = 8e-12
Identities = 193/289 (67%), Gaps = 0/289 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||||||||| | || |||| ||| || || || |||||||| || | ||||||||
Sbjct 294169 CTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGA 294228
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||| || || || || | ||| | || | | | || | ||| | | |||
Sbjct 294229 GGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCC 294288
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || || | ||| || || | || || | |||| ||| ||||| || |||||
Sbjct 294289 AATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTC 294348
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| |||||||||| | || |||||||| | | || || ||| || ||
Sbjct 294349 GATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACC 294408
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATG 2073828
|||||||| || || || | || |||| | | | ||| ||||||
Sbjct 294409 AGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATG 294457
Score = 87.8 bits (96), Expect = 3e-11
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878
||||||||||| | ||| ||||| || | || || ||||||||| ||| |||
Sbjct 293975 GGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTC 294034
Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938
|| || | ||||||||||| ||||| |||||||| ||||||||||| |||
Sbjct 294035 CAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGG 294094
Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979
|| | | |||| || |||| |||||||||||| |||||
Sbjct 294095 TCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTA 294135
>seq52
Length=747234
Score = 89.7 bits (98), Expect = 8e-12
Identities = 114/153 (75%), Gaps = 3/153 (2%)
Strand=Plus/Plus
Query 2019250 CGGCGGCCCAGCAGGCCCTCCGATCGA-CCATGGAAAAGTACACCAACACGACGCGGTTT 2019308
||||| ||||||| |||||||| |||| ||||||| | || ||| || || || ||
Sbjct 157611 CGGCG-CCCAGCAAGCCCTCCG-TCGAACCATGGAGATCTATTCCACAACCACCCGCTTC 157668
Query 2019309 GCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATC 2019368
|| | ||||||||| ||| | |||||||| | ||||| ||| ||||| |||
Sbjct 157669 GCCTTCGCCTGCAACCAATCGAACAAAATCATCGAACCACTCCAATCCCGCTGCGCGATC 157728
Query 2019369 TTGCGCTTTGCGCGCCTCACCGACGCCCAGATC 2019401
| |||| |||||||||||| ||||| ||||||
Sbjct 157729 CTTCGCTATGCGCGCCTCACAGACGCGCAGATC 157761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916234911547412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |