Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq73 131 3e-24 seq79 89.7 8e-12 seq52 89.7 8e-12 >seq73 Length=4627324 Score = 131 bits (144), Expect = 3e-24 Identities = 322/474 (68%), Gaps = 16/474 (3%) Strand=Plus/Minus Query 2411501 GCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGT 2411560 |||| | ||||||||||| ||||| || |||||||||||| || ||||| || | | Sbjct 1434935 GCGCCAGCGCAAAGATCTTCCGCTGATCCACCCCGCCAAACTGCGCATCGACATCCAAAT 1434876 Query 2411561 GCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTG--AGCGGCGGGTTGCG 2411618 ||| ||| || | ||||||||||||||||| | || ||| ||||||| ||| Sbjct 1434875 GCTCCTCATCCAACGCCTGCATGAGCGGGTAAATCAG--ACCTGAAAGCGGCGCATTGTC 1434818 Query 2411619 GTCCATCTTGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACG-CGCGC 2411675 || ||| || |||| ||| | ||||||| ||| | ||| |||||||| ||| Sbjct 1434817 AACCTGCTTCACAACCTCCGCGCCAGCCTTTTTCGCATCATGC--TCGGTCACGACGCTG 1434760 Query 2411676 CGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCAC 2411735 | | ||||| || ||||| | ||||| |||| | ||||| ||||||||| | || Sbjct 1434759 C-TGAGGCGGAATAGGTCCATGGTGTATTTGGCGGAGAGTTGGTAGTCGCTGCCGAGGAC 1434701 Query 2411736 AAATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTC 2411795 || ||||| ||| | |||||| ||| | ||| | ||| ||||| || | Sbjct 1434700 GAACTCGAGTTTATCGATGGGGACGTGGATGGCTTCGAGGAGGGCGGTGATGACATAGCG 1434641 Query 2411796 GTACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGG 2411854 ||| | |||| ||| | ||||||||| || | ||| || |||||| | Sbjct 1434640 GTAGTATTTGGCA-CGGAAGTTGACGAGGTCGATGGGTGCTTTGAGGTTATCGAGGAAGC 1434582 Query 2411855 CGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTT 2411914 |||| | ||| || | |||||| | || | || || || |||| || | ||| |||| Sbjct 1434581 CGTGGATGTCTGCGAGGAGGATTTTGACATGGCAGCCCGCGCGGAGGAAATGGGCGAGTT 1434522 Query 2411915 TAAAGATGGGCACA-AAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCC 2411966 | | ||| || ||| |||||||| ||| || || ||| || | |||||||| Sbjct 1434521 TTACGATTGG-ACAGAAGTAGCCGCAG-TGTGGGCGGCCGGTTGTTGCGGTGCC 1434470 Score = 123 bits (136), Expect = 4e-22 Identities = 92/108 (85%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||| ||||||||| |||| |||||| | || ||||||||||| || || Sbjct 3051784 GCCGCCAACTACCTAGACATCAAGGCCCTTCTCGATATCGGTTGCAAGACCGTCGCAAAT 3051843 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | |||||||||||||| || ||||| ||||||||||| || |||||| Sbjct 3051844 ATGATCAAGGGCAAGTCCCCGGAGGATATCCGCAAGACTTTCAACATC 3051891 Score = 93.3 bits (102), Expect = 7e-13 Identities = 177/256 (69%), Gaps = 10/256 (4%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || ||||| || ||| ||||| |||||||||||||| | | Sbjct 221321 TGACACCGGCCTTCTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCA 221262 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAG---TGCTTCTCGCACC 794007 | ||||| ||||| | || ||||||| | ||| | ||| | || || Sbjct 221261 GGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGC-CC 221203 Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067 ||| ||| || ||||| || |||||||| |||||||| ||||||||||| ||||| Sbjct 221202 AAAGCAACG--AGGAGGCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGT 221145 Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA--AACTCTTTCTCGATCTCGAC 794125 |||| || | ||||| || || || | | |||| | ||||| | |||||| ||| Sbjct 221144 TCATTCCAAGAAGCGCGACCGGGAGAGCAT--CTGAAAGGAACTCCTGCTCGATAGTGAC 221087 Query 794126 GGCCTCGATGATGATC 794141 || || |||||||| Sbjct 221086 AGCTTCAGTGATGATC 221071 Score = 89.7 bits (98), Expect = 8e-12 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| || |||||||||||||| ||||||||||| ||||| || ||||| || Sbjct 220701 GGCTCCTTGATATATGTGTCGATGAGGAGGGAGTAGGTCTCAGAGTGAATATTTTCCATC 220642 Query 794644 GCGATCTGGAAGCCATAAAAGCAG 794667 |||||||||||| || |||||| Sbjct 220641 ATGATCTGGAAGCCGTAGAAGCAG 220618 >seq79 Length=405269 Score = 89.7 bits (98), Expect = 8e-12 Identities = 193/289 (67%), Gaps = 0/289 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||||||||| | || |||| ||| || || || |||||||| || | |||||||| Sbjct 294169 CTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGA 294228 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||| || || || || | ||| | || | | | || | ||| | | ||| Sbjct 294229 GGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCC 294288 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || || | ||| || || | || || | |||| ||| ||||| || ||||| Sbjct 294289 AATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTC 294348 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||| |||||||||| | || |||||||| | | || || ||| || || Sbjct 294349 GATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACC 294408 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATG 2073828 |||||||| || || || | || |||| | | | ||| |||||| Sbjct 294409 AGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATG 294457 Score = 87.8 bits (96), Expect = 3e-11 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878 ||||||||||| | ||| ||||| || | || || ||||||||| ||| ||| Sbjct 293975 GGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTC 294034 Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938 || || | ||||||||||| ||||| |||||||| ||||||||||| ||| Sbjct 294035 CAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGG 294094 Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 || | | |||| || |||| |||||||||||| ||||| Sbjct 294095 TCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTA 294135 >seq52 Length=747234 Score = 89.7 bits (98), Expect = 8e-12 Identities = 114/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 2019250 CGGCGGCCCAGCAGGCCCTCCGATCGA-CCATGGAAAAGTACACCAACACGACGCGGTTT 2019308 ||||| ||||||| |||||||| |||| ||||||| | || ||| || || || || Sbjct 157611 CGGCG-CCCAGCAAGCCCTCCG-TCGAACCATGGAGATCTATTCCACAACCACCCGCTTC 157668 Query 2019309 GCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATC 2019368 || | ||||||||| ||| | |||||||| | ||||| ||| ||||| ||| Sbjct 157669 GCCTTCGCCTGCAACCAATCGAACAAAATCATCGAACCACTCCAATCCCGCTGCGCGATC 157728 Query 2019369 TTGCGCTTTGCGCGCCTCACCGACGCCCAGATC 2019401 | |||| |||||||||||| ||||| |||||| Sbjct 157729 CTTCGCTATGCGCGCCTCACAGACGCGCAGATC 157761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916234911547412