Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq103 113 3e-20
seq75 107 1e-18
seq49 95.1 8e-15
>seq103
Length=249856
Score = 113 bits (124), Expect = 3e-20
Identities = 140/187 (75%), Gaps = 10/187 (5%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGC-TGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||||| | || || || | || | || || || ||||| |||||||||
Sbjct 43197 CCTTCTGAATGTTATAAT-CGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 43255
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||| |||||||| | || | ||||||||||| | ||||| ||||| ||
Sbjct 43256 ATCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGAC--AT 43313
Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962
| ||||| || ||| |||||| |||| ||| |||||||| ||||| ||||||||
Sbjct 43314 --TGTCGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTT 43371
Query 34963 TACAAAG 34969
|| |||
Sbjct 43372 GACGAAG 43378
>seq75
Length=1151455
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| |||| ||| |||| |||| || | ||||||||||||||||||||||| || ||
Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | || |||| || || ||||| || || ||||| || || ||||| ||| | ||
Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||| ||||| || | ||||| ||| ||| | || | || | ||||||
Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACT 638890
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || || || || || || || || || |||||||||||
Sbjct 638891 TCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
Score = 100 bits (110), Expect = 2e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||||||||| ||||| ||||| || ||| | || | ||
Sbjct 639497 AGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGACAGGGTACGGCCGTCT 639556
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||||||||| || |||||||| || ||||||||||| | || | || ||||||||
Sbjct 639557 TCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGGATACCTTCCTTGTCC 639616
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| ||||| | | || | ||| | ||| || || | || ||||||
Sbjct 639617 TGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTCAACGTCGAGAGTGATGGTC 639676
Query 34946 TTTCCCGT 34953
||||| ||
Sbjct 639677 TTTCCGGT 639684
Score = 89.7 bits (98), Expect = 3e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| || || || || || ||||| || || | || | ||
Sbjct 638954 AGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTCC 639013
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || |||||||||||||| ||||||||||||||| | || | || || || ||
Sbjct 639014 TCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCT 639073
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| ||| ||| | || | || | ||||| |||| || || ||
Sbjct 639074 TGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTT 639133
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 639134 TTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 639165
>seq49
Length=1984306
Score = 95.1 bits (104), Expect = 8e-15
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||| ||||||| ||| ||| || |||||||| ||||| || ||| | || ||||
Sbjct 95371 CAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATC 95430
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || || || |||||||||||||| ||||||||||| | || | ||||| |||||
Sbjct 95431 CTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCTTTGTC 95490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692371306852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |