Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq32 114 1e-19
seq50 111 1e-18
>seq32
Length=920050
Score = 114 bits (126), Expect = 1e-19
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191
||||||||||||||| | |||||||||||||| ||| ||||| |||||||| | || ||
Sbjct 392152 TGAATTTTTCTTCCATGCTATGGCTGGTCGTGAGGGTCTTATTGATACAGCTGTCAAGAC 392093
Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239
|||||| ||||| ||||||||| | || || |||||| ||||||||
Sbjct 392092 TGCTGAAACTGGATATATTCAACGGAAGCTGGTCAAGGCTCTTGAAGA 392045
Score = 86.0 bits (94), Expect = 5e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 432283 TGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTG 432342
||| ||| |||||||| ||| | | ||| |||||||||| ||||||||| | ||||
Sbjct 393617 TGAAAGGCAAAGAAGGCCGTCTGCGTCAAAACCTGATGGGAAAACGTGTCGATTTTTCTG 393558
Query 432343 CACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCA 432402
| ||||||||||||||| ||| || ||| | || | ||||||| || || || |||
Sbjct 393557 CTCGTACAGTTATTACTGGTGACCCGAATCTGTCTTTGGATGAAGTCGGAGTCCCAATCA 393498
Query 432403 TTATTGC 432409
|||||
Sbjct 393497 GCATTGC 393491
>seq50
Length=1359123
Score = 111 bits (122), Expect = 1e-18
Identities = 410/637 (64%), Gaps = 4/637 (1%)
Strand=Plus/Minus
Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241
||||| || ||||| || || ||||| |||| | ||| | || | || | | ||
Sbjct 182614 ACAAGGCGGTTATCGAAGTCCTCACCACCCAGATGAGTGTCACCGGCAGTGGACTTGACC 182555
Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301
| ||| | || ||||| | || | || | ||| || || |||||||||| ||
Sbjct 182554 TCGAAGATACCCTCTTCGATAGTAAGGAGGGAAACGTCGAAAGTGCCACCACCCAAGTCG 182495
Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361
||||| || ||||| ||| || || || ||||| || || |||| ||||||
Sbjct 182494 AAAATGAGAACATTGCGTTCACCCTCGGCTTTCTTGTCAAGGCCGTAAGCAATGGCAGCA 182435
Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421
||||| || || || || || | | ||||| ||||||||||| || ||||| ||
Sbjct 182434 GCAGTAGGCTCGTTGATGATACGGAGGACATTGAGACCAGCAATGAGACCAGCATCCTTG 182375
Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481
|| ||||| | ||| || || || || || || |||||||| | |||||| | | ||
Sbjct 182374 GTAGCTTGGCGTTGGGAGTCATTGAAGTAGGCGGGAACAGTGACAACGGCGTTATTGACG 182315
Query 282482 TCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 282541
|||| ||| | || || | | |||| || | | | ||| || || |||
Sbjct 182314 GTGCCACCAAGATATGACTCAGCAGTCTCTCTCATCTTGGTGAGGACCATGGAGGAGATT 182255
Query 282542 TGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT 282600
| ||| |||| | | ||| | || |||| | | || | | | || ||
Sbjct 182254 TCTTCGGGAGTGAACTCCTTCGTCTCGCCCTTGAACTCAATCTGAATGACA-GGCTTGCC 182196
Query 282601 ACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-GTCAT 282659
||| | ||| | || || || ||| |||||||| || || || || | ||
Sbjct 182195 ACCCTTGTCAATGATCTTGAAGGGGAAATGCTTCATATCAGACTGGAC-CTCAGCATCGG 182137
Query 282660 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAG 282719
|| | | ||||| | || ||||| || |||| |||||| |||| || | ||
Sbjct 182136 CGAACTTGCGGCCAATGAGACGCTTTGCGTCGAAAACTGTATTGCTTGGGTTCATGGCGA 182077
Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 282779
|||||| || || ||||| || || ||| | ||||| ||||| || | ||| | || |
Sbjct 182076 CTTGATTCTTTGCAGCATCGCCGATGAGACGCTCTGTGTCTGTGAAGGCAACGAACGAGG 182017
Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816
| || || || ||||| || || || ||||| |||||
Sbjct 182016 GCGTGGTCCGGTTACCCTGGTCGTTGGCAATGATTTC 181980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740625097656408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |