Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq32 114 1e-19 seq50 111 1e-18 >seq32 Length=920050 Score = 114 bits (126), Expect = 1e-19 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 ||||||||||||||| | |||||||||||||| ||| ||||| |||||||| | || || Sbjct 392152 TGAATTTTTCTTCCATGCTATGGCTGGTCGTGAGGGTCTTATTGATACAGCTGTCAAGAC 392093 Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239 |||||| ||||| ||||||||| | || || |||||| |||||||| Sbjct 392092 TGCTGAAACTGGATATATTCAACGGAAGCTGGTCAAGGCTCTTGAAGA 392045 Score = 86.0 bits (94), Expect = 5e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 432283 TGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTG 432342 ||| ||| |||||||| ||| | | ||| |||||||||| ||||||||| | |||| Sbjct 393617 TGAAAGGCAAAGAAGGCCGTCTGCGTCAAAACCTGATGGGAAAACGTGTCGATTTTTCTG 393558 Query 432343 CACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCA 432402 | ||||||||||||||| ||| || ||| | || | ||||||| || || || ||| Sbjct 393557 CTCGTACAGTTATTACTGGTGACCCGAATCTGTCTTTGGATGAAGTCGGAGTCCCAATCA 393498 Query 432403 TTATTGC 432409 ||||| Sbjct 393497 GCATTGC 393491 >seq50 Length=1359123 Score = 111 bits (122), Expect = 1e-18 Identities = 410/637 (64%), Gaps = 4/637 (1%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 ||||| || ||||| || || ||||| |||| | ||| | || | || | | || Sbjct 182614 ACAAGGCGGTTATCGAAGTCCTCACCACCCAGATGAGTGTCACCGGCAGTGGACTTGACC 182555 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || ||||| | || | || | ||| || || |||||||||| || Sbjct 182554 TCGAAGATACCCTCTTCGATAGTAAGGAGGGAAACGTCGAAAGTGCCACCACCCAAGTCG 182495 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 ||||| || ||||| ||| || || || ||||| || || |||| |||||| Sbjct 182494 AAAATGAGAACATTGCGTTCACCCTCGGCTTTCTTGTCAAGGCCGTAAGCAATGGCAGCA 182435 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||| || || || || || | | ||||| ||||||||||| || ||||| || Sbjct 182434 GCAGTAGGCTCGTTGATGATACGGAGGACATTGAGACCAGCAATGAGACCAGCATCCTTG 182375 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481 || ||||| | ||| || || || || || || |||||||| | |||||| | | || Sbjct 182374 GTAGCTTGGCGTTGGGAGTCATTGAAGTAGGCGGGAACAGTGACAACGGCGTTATTGACG 182315 Query 282482 TCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 282541 |||| ||| | || || | | |||| || | | | ||| || || ||| Sbjct 182314 GTGCCACCAAGATATGACTCAGCAGTCTCTCTCATCTTGGTGAGGACCATGGAGGAGATT 182255 Query 282542 TGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT 282600 | ||| |||| | | ||| | || |||| | | || | | | || || Sbjct 182254 TCTTCGGGAGTGAACTCCTTCGTCTCGCCCTTGAACTCAATCTGAATGACA-GGCTTGCC 182196 Query 282601 ACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-GTCAT 282659 ||| | ||| | || || || ||| |||||||| || || || || | || Sbjct 182195 ACCCTTGTCAATGATCTTGAAGGGGAAATGCTTCATATCAGACTGGAC-CTCAGCATCGG 182137 Query 282660 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAG 282719 || | | ||||| | || ||||| || |||| |||||| |||| || | || Sbjct 182136 CGAACTTGCGGCCAATGAGACGCTTTGCGTCGAAAACTGTATTGCTTGGGTTCATGGCGA 182077 Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 282779 |||||| || || ||||| || || ||| | ||||| ||||| || | ||| | || | Sbjct 182076 CTTGATTCTTTGCAGCATCGCCGATGAGACGCTCTGTGTCTGTGAAGGCAACGAACGAGG 182017 Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816 | || || || ||||| || || || ||||| ||||| Sbjct 182016 GCGTGGTCCGGTTACCCTGGTCGTTGGCAATGATTTC 181980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740625097656408