Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq75 156 8e-33 >seq75 Length=1151455 Score = 156 bits (172), Expect = 8e-33 Identities = 177/232 (76%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| || || |||||||| || ||||| || || | Sbjct 638937 TACCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTG 638996 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || ||| ||||| || || |||||||| || ||||| |||| ||| || ||||| | Sbjct 638997 AGAGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTG 639056 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAG-GTTC 82759 | || ||||| ||||||||||| ||||||||| || || ||||| ||||| | || ||| Sbjct 639057 GGATACCTTCTTTATCTTGAAT-TTTGCTTTTAACGTTGTCAATGGTATC-TGAGCTTTC 639114 Query 82760 TACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| | ||| ||||| ||||| |||| ||||| || || ||||||||| Sbjct 639115 GACTTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 123 bits (136), Expect = 5e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | ||| | || || || || ||||| || ||||| || ||||||||||| Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || |||||||| || || ||||||||||| || | || |||||||| || Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGC-TTTTACATTTTCAATCGTATCATTAGGT-TCTA 82761 || |||||||||||||| || ||||| |||||| || ||||| || || || | || | Sbjct 638831 ATCCCTTCCTTATCTTGGAT-TTTGCTTTTTACGTTATCAATTGTGTC-GGAGCTCTCGA 638888 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || || ||||| |||| || || || || |||||||| Sbjct 638889 CTTCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825841396612