Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq73 136 4e-27 seq103 109 5e-19 seq75 98.7 1e-15 >seq73 Length=4627324 Score = 136 bits (150), Expect = 4e-27 Identities = 347/522 (66%), Gaps = 21/522 (4%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| |||||||| || || || || ||||| || ||||| ||| || ||||||| Sbjct 221308 CTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTGTC 221249 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || || || |||||| | | |||| || |||| | |||||| ||||| || Sbjct 221248 CATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAAAGCAACGAGGAG 221189 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 || || || || ||||||||||| | ||||||| || |||||||| || || | ||| Sbjct 221188 GCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAAGCGC 221129 Query 120531 CACCGGCAACGCCGACGTGAAA--AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 ||||| | || | ||||| ||||||| ||| || || || || || ||| Sbjct 221128 GACCGGGAGAGC--ATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTG---ATG 221074 Query 120589 GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATG----CGC--GTTCG-GTAGTACAG 120641 || | | | | || ||||| | || | ||| || | | || || Sbjct 221073 ------ATCCTCTCGAC-AGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAG 221021 Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 || || || || ||||| | ||||||||| || || || |||||||| |||||| || Sbjct 221020 ACAGGCGAAATCAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAG 220961 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 ||| ||||||| ||| |||| | |||| || | || ||| || ||||| Sbjct 220960 GCCAGGCATGAGGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAA 220901 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821 | ||| || ||| || |||||||| | |||| || || || | | ||| || Sbjct 220900 GATGCCTTCGACGGCAGCGAAGGCGACGAGACGCTGTGCAAAGGTGGACTCCTTATCTTC 220841 Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 ||||||| || ||||| || ||||| ||||| | ||| || Sbjct 220840 GATCCACCGGATAGCCCAATCAGCCTTCTTGCGGATGCAGGG 220799 >seq103 Length=249856 Score = 109 bits (120), Expect = 5e-19 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||| || || ||||||| | ||| || || ||||| ||||||||||| ||| | | Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCG--TCCTCAAGCTGCTTGCCGGCGAAGA 43256 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | |||||||||||||| |||||||| |||||||| ||| || ||||| | | Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | |||||| ||| ||| || || | ||||| ||| ||||| || || || || |||| Sbjct 43317 CGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 43376 Query 133651 A 133651 | Sbjct 43377 A 43377 >seq75 Length=1151455 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||| ||||| || || ||||| | ||| | | | || || || Sbjct 638732 AAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCA-TCTTCTAG 638790 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | ||||| |||||||| || || || || |||||||| || ||| Sbjct 638791 CTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATCTTGGAT 638850 Query 133574 CTTTTGCTTG--AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||||||| | | |||| ||||||| | ||| || || | |||| |||||| Sbjct 638851 --TTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAGTTTTG 638908 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||||||||| ||||| |||||||| Sbjct 638909 CCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 ||||| ||||| || |||||||| || | || || || ||||| ||||| || | Sbjct 638969 GTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCG--TCCTCAAGCTGTTTTC 639026 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| || |||||||| || ||||| ||||| || || ||| ||||||| Sbjct 639027 CGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCT-TGAA-TTTTGCT 639084 Query 133582 TG--AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 | | | |||| || || | | || || || | || | |||||||||||||| Sbjct 639085 TTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCGGTCAG 639144 Query 133640 AGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 639145 GGTCTTAACGAAGATCTGCAT 639165 Score = 82.4 bits (90), Expect = 7e-11 Identities = 132/185 (71%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| ||||| ||||| || ||||| || || || ||| ||| || | Sbjct 639503 AAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGACAGGGT--ACGGCCGTCTTCCA 639560 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | |||||||| ||| | || || || |||||||| |||||||| ||||||||||| || Sbjct 639561 GTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGGATACCTTCCTTGTCCTGGA 639620 Query 133573 TCTTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 | || ||||| |||| || | || || | ||| ||||||| |||| ||| || Sbjct 639621 TTTTGGACTTGA-CTGCGTCGATAGTATCACCTGACTCAACGTCGAGAGTGATGGTCTTT 639679 Query 133632 CCGGT 133636 ||||| Sbjct 639680 CCGGT 639684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420147381920