Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq73 136 4e-27
seq103 109 5e-19
seq75 98.7 1e-15
>seq73
Length=4627324
Score = 136 bits (150), Expect = 4e-27
Identities = 347/522 (66%), Gaps = 21/522 (4%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| |||||||| || || || || ||||| || ||||| ||| || |||||||
Sbjct 221308 CTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTGTC 221249
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || || || |||||| | | |||| || |||| | |||||| ||||| ||
Sbjct 221248 CATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAAAGCAACGAGGAG 221189
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
|| || || || ||||||||||| | ||||||| || |||||||| || || | |||
Sbjct 221188 GCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAAGCGC 221129
Query 120531 CACCGGCAACGCCGACGTGAAA--AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588
||||| | || | ||||| ||||||| ||| || || || || || |||
Sbjct 221128 GACCGGGAGAGC--ATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTG---ATG 221074
Query 120589 GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATG----CGC--GTTCG-GTAGTACAG 120641
|| | | | | || ||||| | || | ||| || | | || ||
Sbjct 221073 ------ATCCTCTCGAC-AGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAG 221021
Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701
|| || || || ||||| | ||||||||| || || || |||||||| |||||| ||
Sbjct 221020 ACAGGCGAAATCAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAG 220961
Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761
||| ||||||| ||| |||| | |||| || | || ||| || |||||
Sbjct 220960 GCCAGGCATGAGGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAA 220901
Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821
| ||| || ||| || |||||||| | |||| || || || | | ||| ||
Sbjct 220900 GATGCCTTCGACGGCAGCGAAGGCGACGAGACGCTGTGCAAAGGTGGACTCCTTATCTTC 220841
Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
||||||| || ||||| || ||||| ||||| | ||| ||
Sbjct 220840 GATCCACCGGATAGCCCAATCAGCCTTCTTGCGGATGCAGGG 220799
>seq103
Length=249856
Score = 109 bits (120), Expect = 5e-19
Identities = 134/181 (74%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 133473 TTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530
||||| || || ||||||| | ||| || || ||||| ||||||||||| ||| | |
Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCG--TCCTCAAGCTGCTTGCCGGCGAAGA 43256
Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590
| | |||||||||||||| |||||||| |||||||| ||| || ||||| | |
Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316
Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650
| | |||||| ||| ||| || || | ||||| ||| ||||| || || || || ||||
Sbjct 43317 CGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGA 43376
Query 133651 A 133651
|
Sbjct 43377 A 43377
>seq75
Length=1151455
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/209 (72%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| ||| ||||| || || ||||| | ||| | | | || || ||
Sbjct 638732 AAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCA-TCTTCTAG 638790
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || | ||||| |||||||| || || || || |||||||| || |||
Sbjct 638791 CTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATCTTGGAT 638850
Query 133574 CTTTTGCTTG--AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
||||||| | | |||| ||||||| | ||| || || | |||| ||||||
Sbjct 638851 --TTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAGTTTTG 638908
Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||||||||| ||||| ||||||||
Sbjct 638909 CCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
Score = 82.4 bits (90), Expect = 7e-11
Identities = 142/201 (71%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
||||| ||||| || |||||||| || | || || || ||||| ||||| || |
Sbjct 638969 GTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCG--TCCTCAAGCTGTTTTC 639026
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| || |||||||| || ||||| ||||| || || ||| |||||||
Sbjct 639027 CGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCT-TGAA-TTTTGCT 639084
Query 133582 TG--AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639
| | | |||| || || | | || || || | || | ||||||||||||||
Sbjct 639085 TTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTGCCGGTCAG 639144
Query 133640 AGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||
Sbjct 639145 GGTCTTAACGAAGATCTGCAT 639165
Score = 82.4 bits (90), Expect = 7e-11
Identities = 132/185 (71%), Gaps = 6/185 (3%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
|| || | ||| ||||| ||||| || ||||| || || || ||| ||| || |
Sbjct 639503 AAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGACAGGGT--ACGGCCGTCTTCCA 639560
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
| |||||||| ||| | || || || |||||||| |||||||| ||||||||||| ||
Sbjct 639561 GTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGGATACCTTCCTTGTCCTGGA 639620
Query 133573 TCTTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
| || ||||| |||| || | || || | ||| ||||||| |||| ||| ||
Sbjct 639621 TTTTGGACTTGA-CTGCGTCGATAGTATCACCTGACTCAACGTCGAGAGTGATGGTCTTT 639679
Query 133632 CCGGT 133636
|||||
Sbjct 639680 CCGGT 639684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420147381920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |