Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq79 132 1e-25 >seq79 Length=405269 Score = 132 bits (146), Expect = 1e-25 Identities = 452/694 (65%), Gaps = 13/694 (2%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || || || ||||| ||| | || || ||||||| ||||| |||| ||| | | | Sbjct 294600 TACTTCGGATTCAAGACTTTGGAGCGGTCTTATTTGCTTCGAATCAACGGCAAAGTTGCT 294541 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||||| || ||||||||| | | |||||||| | || ||||| ||| | ||| | | Sbjct 294540 GAACGCCCCCAACACATGATCATGCGTGTTGCTGTCGGAATTCACGGAGACGATGTAGAG 294481 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT--ATTCATGCTACTCCTA 110481 || || ||| ||| | | | | |||| | || | |||||| |||||| Sbjct 294480 AAAGTCATCGAAACATATAACCTCATGTCTCAAAA--ATTCTTCACGCATGCTTCTCCTA 294423 Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541 |||| || || || || || | || ||||||| ||||| ||| | | || | Sbjct 294422 CCCTTTTCAATGCTGGTACCCCGCAACCTCAGATGGCTTCGTGCTTCCTTATCGACATGA 294363 Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAA 110600 | || || ||| || |||||||| || | || |||| ||| | ||||| ||| Sbjct 294362 AGGAGGACAGTATCGAGGGTATTTACGACACG-TTGAAGACTTGTGCCTTGATTTC-AAA 294305 Query 110601 AACT-CTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 ||| |||| || ||||| | || |||| ||||| | || | | || || Sbjct 294304 GACTGCTGGTGGTATTGGCCTCAACATTCACCGCATTCGTGGCACTGGTTCTTACATTGC 294245 Query 110660 AACAGCGAAGGG-TGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTG 110718 | |||| || | || |||| ||| | ||||| ||| | |||| |||||| |||||| Sbjct 294244 CGGAACGAATGGCTCCTCCAAC-GGAATCGTTCCCATGCTGCGAGTTTTCAACAACACTG 294186 Query 110719 CAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAAC 110775 | | |||||| | || || ||||| | | || | || ||||| || || || | Sbjct 294185 CTAGATATGTCGACCAGGGAGGTAACAAGCGGCCGGGAGCTTTCGCTATTTACCTTGAGC 294126 Query 110776 CTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAAC 110835 | ||||| | ||||| || |||||||| || |||||||| || || ||| || ||| Sbjct 294125 CGTGGCACACCGATATCTTCGAATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGAAG 294066 Query 110836 AAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTC 110895 | || || ||| | || || | |||| | ||| | || |||||||||||| Sbjct 294065 TTCGGGCTCGCGATCTCTTCCTGGCTCTCTGGACACCCGATCTGTTTATGAAACGTGTTG 294006 Query 110896 AAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTAT 110955 | |||||||| ||| |||| | || || || | || || | | ||||| | Sbjct 294005 AGAAAAATGGCGAATGGACTCTCTTTTGCCCCAATGAAGCCCCAGGCTTGGCGGATGTCT 293946 Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 |||| | |||||||| | |||||||| || || Sbjct 293945 ATGGCGACGAGTTTGAGGCTCTTTACGAGAAGTA 293912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811157747788