Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq75 113 5e-20 seq49 93.3 4e-14 seq73 91.5 1e-13 >seq75 Length=1151455 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || |||||||| ||||| || |||||||| | || | ||| || Sbjct 638957 ACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTCCTCA 639016 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || || || || | || ||||| || || || || |||||||| |||||| Sbjct 639017 AGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 639076 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||| || ||| | || || || ||| || || |||||||| ||||| Sbjct 639077 ATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTTTTG 639136 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| | || |||||||| || |||||| Sbjct 639137 CCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557 || |||||| | || || ||| ||||| |||||||| || || || || | Sbjct 638722 TCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCC 638781 Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 || || ||||| || || ||||| || | |||||||||||| || || || ||||| || Sbjct 638782 ATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTT 638841 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 ||||| ||||| ||| || || | ||||||||| || || || || || || Sbjct 638842 ATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGAT 638901 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| | |||||| ||||| || ||||| Sbjct 638902 AGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 102 bits (112), Expect = 8e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | || || || || |||||||| ||||| ||||| || ||| Sbjct 639165 TTCCACCACGGAGGCGAAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGG 639224 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || |||||||| || || || || |||||||| ||||| || || | Sbjct 639225 ACAAGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGG 639284 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||||||||| || || ||||| || || ||| | || || || ||||||| Sbjct 639285 GGATGCCTTCTTTATCCTGGATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCA 639344 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | || | ||||| || || || || | ||||| |||| Sbjct 639345 CCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTTGACGA 639383 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | ||| || | || | ||| || || || ||||| || ||||||||||| Sbjct 639480 TTCCTCCACGGAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTG 639539 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | ||| || || || ||||| || || || | || ||||| || || | Sbjct 639540 ACAGGGTACGGCCGTCTTCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAG 639599 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || ||||| ||||| ||||| | || || || || | Sbjct 639600 GGATACCTTCCTTGTCCTGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTCAA 639659 Query 134665 CGTCGAGAGTAATGGTTTTACCGGT 134689 |||||||||| ||||| || ||||| Sbjct 639660 CGTCGAGAGTGATGGTCTTTCCGGT 639684 >seq49 Length=1984306 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||||| || || || || |||||||||||||||||| || ||| | Sbjct 95366 AGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGG 95425 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||||||||| || || |||| || ||||| ||||| || || || ||| Sbjct 95426 CCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCT 95485 Query 134616 TTTTCT 134621 || ||| Sbjct 95486 TTGTCT 95491 >seq73 Length=4627324 Score = 91.5 bits (100), Expect = 1e-13 Identities = 169/243 (70%), Gaps = 10/243 (4%) Strand=Plus/Minus Query 21422 TCTTGTATTCGCCGACCCGTCTTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTT 21481 ||| ||| |||||||| || |||| ||||| || || || || | || | ||||| | Sbjct 221309 TCTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTGT 221250 Query 21482 TCATAAAATTAAAAGGATTGCTGGCGTAAAAACACCTTTCTTCGTT---CAATTCCACGC 21538 ||| || | ||| || ||| ||| || | | ||||||| ||| ||| | ||| Sbjct 221249 CCATGAAGTCAAATGGGTTGGTGGAGTTATAGA--CTTTCTT-GTTGCCCAAAGCAACGA 221193 Query 21539 ACAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACA 21598 | ||||| || ||||| ||||||||||| |||||| | | ||||| || | | Sbjct 221192 GGAGGCGATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAA 221133 Query 21599 GATCGACCGGTAGCGCTTCGGTGAAA--AACTCCTTCTCGATAGCCACCGCTTCCTTGAT 21656 | ||||||| || || || ||||| ||||||| |||||||| || ||||| |||| Sbjct 221132 GCGCGACCGGGAGAGCATC--TGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGAT 221075 Query 21657 CAT 21659 || Sbjct 221074 GAT 221072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397717712160