Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq79 123 3e-23 seq27 109 7e-19 >seq79 Length=405269 Score = 123 bits (136), Expect = 3e-23 Identities = 405/629 (64%), Gaps = 9/629 (1%) Strand=Plus/Plus Query 111462 CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT 111521 ||||||| ||| || || |||||||| || || | || | | ||||| || | Sbjct 293910 CGTACTTCTCGTAAAGAGCCTCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTT 293969 Query 111522 TGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTG 111581 | || || || |||| ||||| ||| || |||||| || ||||| || || || | Sbjct 293970 CATTGGGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGG 294029 Query 111582 GAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641 | |||| || | |||||||| | | |||| | || || | || ||||| | Sbjct 294030 GTGTCCAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTAC 294089 Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 111701 | | || | ||| || | |||||| | |||||| |||||||| || | |||| || || Sbjct 294090 GAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTC 294149 Query 111702 CCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755 || | ||| || | || | ||||| | || ||| ||| || || || | Sbjct 294150 CCG---GCCGCTTGTTACCTCCCTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCA 294206 Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 111815 |||| |||| || || | || ||||| || || ||| ||| | || | | Sbjct 294207 GCATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCAC 294266 Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875 | || |||| | |||||||| ||||| |||||| || ||||| | Sbjct 294267 GAATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCT 294326 Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935 | | || | || ||||| | ||| ||||||||| || ||||||||||||| | Sbjct 294327 TCAACGTGTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAG 294386 Query 111936 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC 111995 |||||| ||| || |||||||||||||| ||||| || | || || |||| | Sbjct 294387 CCATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATT 294446 Query 111996 CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 112055 ||| ||||| || ||||| || | ||| || | || || ||||| || |||| Sbjct 294447 TTTGAGACATGAGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGA 294506 Query 112056 TTGCGACCCGCATGAACATGTACTGTGGG 112084 || || ||||||| ||||| || ||| Sbjct 294507 CAGCAACACGCATGATCATGTGTTGGGGG 294535 Score = 91.5 bits (100), Expect = 2e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || |||| ||| || || |||| || || | |||||||| || ||||||||| Sbjct 293674 ATCTCAGTGCATAGGTTAGAGCTTCTAATTGTGCCGAGGTTCTTTTGATTGCTCTTCTTG 293733 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 |||||||| |||||||| ||||| | || | || ||||| || || | || |||||| Sbjct 293734 TTGCACGCGTCCTTGTAAAGCATAAATGGGTTACCAGTCTCAGTTTGAGCTTCAAGAATA 293793 Query 111410 GCCTTCCAAA 111419 || | ||||| Sbjct 293794 GCATACCAAA 293803 >seq27 Length=845112 Score = 109 bits (120), Expect = 7e-19 Identities = 330/504 (65%), Gaps = 33/504 (7%) Strand=Plus/Plus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 ||||| || || || || || || || | |||||||||||| || ||||| || | || Sbjct 463351 TCAAATCGGCCAGGTCGCAGCAGTGCCTTATCAAGGATATCAACTCGATTTGTTCCAGCC 463410 Query 11513 ATAACCACAATGCCAGTCTCAT---TGTCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569 | ||| |||| | || ||| ||| ||||||||||| || ||||| | |||||| Sbjct 463411 AGAACGACAA--CTTGT-TCAGAAGTGTTGAAGCCATCCATTTCTGTGAGAATTTGATTC 463467 Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTG---------- 11619 | || ||| | ||| || ||| | ||||||| | ||||| Sbjct 463468 AGCGTGCTTTCCCGCTCGTCGTTTCC------ACCACCATAA--GCGTTTTTCGACCTCG 463519 Query 11620 -CTTGCCCACCGCATCAATCTCATCAATGAAGACAATAC-ATGGTTGATTTTCGCGGGCG 11677 ||| || | |||||||||||||||||||| | ||||| | || || ||||| || || Sbjct 463520 ACTTCCCAATAGCATCAATCTCATCAATGAATATAATACAAGGGGTGTTTTTC-CGAGCA 463578 Query 11678 ATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTT 11737 | |||| ||||||||||| | | || |||||||| ||||| || || || | Sbjct 463579 GTGGCAAATAGATCGCGAACTCGGGAAGGCCCAACACCAACGAACATTTCGACGAA---T 463635 Query 11738 GCGGCAGAGCACTGGATG---AATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGG 11794 ||| | || | | || || || ||| || || || || | ||| || || Sbjct 463636 TCGGAACCGCTCACGCTGTAAAACGGAACACCCGACTCGCCAGCTGTAGCTTTTGCCAGT 463695 Query 11795 AGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA 11854 | ||||| || ||||| || || | || | |||||||||||||||||||||||| Sbjct 463696 AATGTCTTACCGGTACCCGGTGGCCCAGAAAGGATAGCGCCTCGGGGGATCTTGGCACCA 463755 Query 11855 CTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTG 11914 | || ||| |||| ||| ||||| || | || || ||| ||||| Sbjct 463756 AGCCGTTGGAATTGCTCCGGTTTCTTCAGAAAGCTGACGAATTCCATAATCTCAACTTTG 463815 Query 11915 GCCGCGTCAATCCCCTCAACATCA 11938 ||| |||| || || | |||||| Sbjct 463816 GCCTCGTCCATACCGGCCACATCA 463839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031152156800