Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq79 123 3e-23
seq27 109 7e-19
>seq79
Length=405269
Score = 123 bits (136), Expect = 3e-23
Identities = 405/629 (64%), Gaps = 9/629 (1%)
Strand=Plus/Plus
Query 111462 CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT 111521
||||||| ||| || || |||||||| || || | || | | ||||| || |
Sbjct 293910 CGTACTTCTCGTAAAGAGCCTCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTT 293969
Query 111522 TGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTG 111581
| || || || |||| ||||| ||| || |||||| || ||||| || || || |
Sbjct 293970 CATTGGGGCAAAAGAGAGTCCATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGG 294029
Query 111582 GAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641
| |||| || | |||||||| | | |||| | || || | || ||||| |
Sbjct 294030 GTGTCCAGAGAGCCAGGAAGAGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTAC 294089
Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 111701
| | || | ||| || | |||||| | |||||| |||||||| || | |||| || ||
Sbjct 294090 GAAGGTCCAAGAATTCGAAGATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTC 294149
Query 111702 CCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755
|| | ||| || | || | ||||| | || ||| ||| || || || |
Sbjct 294150 CCG---GCCGCTTGTTACCTCCCTGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCA 294206
Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 111815
|||| |||| || || | || ||||| || || ||| ||| | || | |
Sbjct 294207 GCATGGGAACGATTCCGTTGGAGGAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCAC 294266
Query 111816 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 111875
| || |||| | |||||||| ||||| |||||| || ||||| |
Sbjct 294267 GAATGCGGTGAATGTTGAGGCCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCT 294326
Query 111876 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGG 111935
| | || | || ||||| | ||| ||||||||| || ||||||||||||| |
Sbjct 294327 TCAACGTGTCGTAAATACCCTCGATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAG 294386
Query 111936 ACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC 111995
|||||| ||| || |||||||||||||| ||||| || | || || |||| |
Sbjct 294387 CCATCTGAGGTTGCGGGGTACCAGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATT 294446
Query 111996 CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 112055
||| ||||| || ||||| || | ||| || | || || ||||| || ||||
Sbjct 294447 TTTGAGACATGAGGTTATATGTTTCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGA 294506
Query 112056 TTGCGACCCGCATGAACATGTACTGTGGG 112084
|| || ||||||| ||||| || |||
Sbjct 294507 CAGCAACACGCATGATCATGTGTTGGGGG 294535
Score = 91.5 bits (100), Expect = 2e-13
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349
|| || || |||| ||| || || |||| || || | |||||||| || |||||||||
Sbjct 293674 ATCTCAGTGCATAGGTTAGAGCTTCTAATTGTGCCGAGGTTCTTTTGATTGCTCTTCTTG 293733
Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409
|||||||| |||||||| ||||| | || | || ||||| || || | || ||||||
Sbjct 293734 TTGCACGCGTCCTTGTAAAGCATAAATGGGTTACCAGTCTCAGTTTGAGCTTCAAGAATA 293793
Query 111410 GCCTTCCAAA 111419
|| | |||||
Sbjct 293794 GCATACCAAA 293803
>seq27
Length=845112
Score = 109 bits (120), Expect = 7e-19
Identities = 330/504 (65%), Gaps = 33/504 (7%)
Strand=Plus/Plus
Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512
||||| || || || || || || || | |||||||||||| || ||||| || | ||
Sbjct 463351 TCAAATCGGCCAGGTCGCAGCAGTGCCTTATCAAGGATATCAACTCGATTTGTTCCAGCC 463410
Query 11513 ATAACCACAATGCCAGTCTCAT---TGTCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569
| ||| |||| | || ||| ||| ||||||||||| || ||||| | ||||||
Sbjct 463411 AGAACGACAA--CTTGT-TCAGAAGTGTTGAAGCCATCCATTTCTGTGAGAATTTGATTC 463467
Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTG---------- 11619
| || ||| | ||| || ||| | ||||||| | |||||
Sbjct 463468 AGCGTGCTTTCCCGCTCGTCGTTTCC------ACCACCATAA--GCGTTTTTCGACCTCG 463519
Query 11620 -CTTGCCCACCGCATCAATCTCATCAATGAAGACAATAC-ATGGTTGATTTTCGCGGGCG 11677
||| || | |||||||||||||||||||| | ||||| | || || ||||| || ||
Sbjct 463520 ACTTCCCAATAGCATCAATCTCATCAATGAATATAATACAAGGGGTGTTTTTC-CGAGCA 463578
Query 11678 ATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTT 11737
| |||| ||||||||||| | | || |||||||| ||||| || || || |
Sbjct 463579 GTGGCAAATAGATCGCGAACTCGGGAAGGCCCAACACCAACGAACATTTCGACGAA---T 463635
Query 11738 GCGGCAGAGCACTGGATG---AATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGG 11794
||| | || | | || || || ||| || || || || | ||| || ||
Sbjct 463636 TCGGAACCGCTCACGCTGTAAAACGGAACACCCGACTCGCCAGCTGTAGCTTTTGCCAGT 463695
Query 11795 AGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA 11854
| ||||| || ||||| || || | || | ||||||||||||||||||||||||
Sbjct 463696 AATGTCTTACCGGTACCCGGTGGCCCAGAAAGGATAGCGCCTCGGGGGATCTTGGCACCA 463755
Query 11855 CTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTG 11914
| || ||| |||| ||| ||||| || | || || ||| |||||
Sbjct 463756 AGCCGTTGGAATTGCTCCGGTTTCTTCAGAAAGCTGACGAATTCCATAATCTCAACTTTG 463815
Query 11915 GCCGCGTCAATCCCCTCAACATCA 11938
||| |||| || || | ||||||
Sbjct 463816 GCCTCGTCCATACCGGCCACATCA 463839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031152156800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |