Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq79 154 2e-32
seq73 125 9e-24
>seq79
Length=405269
Score = 154 bits (170), Expect = 2e-32
Identities = 520/798 (65%), Gaps = 14/798 (2%)
Strand=Plus/Plus
Query 118101 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACT 118158
||||| ||||| || | ||| |||| || ||| ||| |||||||| || |
Sbjct 293011 GACCATAGACCCATGTCCACGAGGTCCTTCAGGAGCCATGG--ATTGACAATTTGGAATT 293068
Query 118159 CACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 118218
||||||| || || | | || ||||||| ||||| || || |||||||| |||
Sbjct 293069 CACCCGCCAGAACACGGCGCGAGTAAATATTGGAGGTGTAGGGTTCGAAGCACTCGTTGA 293128
Query 118219 TACCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277
|||| ||| | ||||| || ||| || |||||||| || | || | || |||||
Sbjct 293129 -ACCCCAGAATCTGGCTGGTGCTGGCAGTAGGCATGGGCGCAACAAGCAAACTATTACGA 293187
Query 118278 AGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 118337
| || | | ||| || || || | |||||| || || | | |
Sbjct 293188 ACTCCATGCTTAGCAATATCTTGTTTCAGCGAGTCCCAATCCCAGAGGTCGGTGGGAGTG 293247
Query 118338 CCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCA 118397
| | |||||||||| | || ||||| |||||||| |||| || || ||| | ||
Sbjct 293248 ACGTTCCACATATCATATTGAAGGATGCCTTGGGAAACTGGGGAACCTTCATACGTGGAG 293307
Query 118398 TATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTT 118457
|||||||| |||| | |||||||| | ||| | | ||||| || ||||||
Sbjct 293308 TATGGGCCGTCAATTTTAGCCAATTCACAAGACGCAGTCAAACCCGCGTGGTAGATTGTT 293367
Query 118458 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA 118517
|| ||||| || |||| ||| |||||| |||||| || | || || | |
Sbjct 293368 TCGAAAATTTGAATGTTCAACTGCTTAGCCTCGGGGGAATCGAATGGAAGCCGCAAAGCA 293427
Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577
| || |||| || ||||| ||||||||| |||| || ||||| | | ||| |
Sbjct 293428 AGGAAAGCATCAGCAAGACCCTGGACACCGCAAGCAATGGGACGATGACGGAAATTG--C 293485
Query 118578 TTCCGAGCGGT--CTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGG 118635
||| | | ||| || ||||| | |||| |||||| | | | || |||||
Sbjct 293486 TTCGTTTTGCTTCCTCGACCGGATAGTAGTTCCGATCGATGATCTTGTTAAGATTGCGAA 293545
Query 118636 TGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA-CTGCGAGTCTCTTCATTG 118694
||| |||| || | ||| || ||||| || ||||| | || | | | |||
Sbjct 293546 CGACGACCTGAGTTACTTCGTGGAGCTTGCCGAAATCATACTCTCCCCGGA-CAGCATCC 293604
Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754
||| | |||| | || || |||||||| ||||| || | ||||| | ||
Sbjct 293605 ACAAAAGTAGGCAAAGCAATAGACGCCAGGTTACAAACTGCAACTTCATC-TGGCGAGCA 293663
Query 118755 -TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813
|| || || || || ||||| | ||| || || |||| ||||| | ||||||||||||
Sbjct 293664 ATATTCGATGATCTCAGTGCATAGGTTAGAGCTTCTAATTGTGCCGAGGTTCTTTTGATT 293723
Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873
||| |||| ||||| |||||||||||||| |||| | || ||||| ||||| |
Sbjct 293724 GCTCTTCTTGTTGCACGCGTCCTTGTAAAGCATAAATGGGTTACCAGTCTCAGTTTGAGC 293783
Query 118874 CTTGAGAATAGCCTTCCA 118891
| |||||||| | |||
Sbjct 293784 TTCAAGAATAGCATACCA 293801
>seq73
Length=4627324
Score = 125 bits (138), Expect = 9e-24
Identities = 301/450 (67%), Gaps = 4/450 (1%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||| ||||||||||| ||||| ||| ||| | ||| || |||||
Sbjct 221304 TAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTGTCCATG 221245
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-TTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| ||||||||||| | ||||| | | || || | |||| |||||| ||
Sbjct 221244 AAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAAAGCAAC-GAGGAGGCG 221186
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG-GTTAC 129905
||| | |||| |||||||||| | |||| || || |||||| || | || | ||
Sbjct 221185 ATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAAGCGCGAC 221126
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
||||| || || | | |||| ||| ||| || |||||||| | ||| |
Sbjct 221125 C-GGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGATGATCCTCT 221067
Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025
| | ||| || || | | ||||| |||||| ||| || ||
Sbjct 221066 CGACAGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAGACAGGCGAAATCAG 221007
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
||| | ||||||||||| || || || || || || || || || |||||||| |
Sbjct 221006 TGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGCCAGGCATGAGGC 220947
Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145
|||| |||||||||||||| |||| | || || ||| ||||||||| || || ||
Sbjct 220946 CCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGATGCCTTCGACGG 220887
Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
||||| || | |||||||| |||||||
Sbjct 220886 CAGCGAAGGCGACGAGACGCTGTGCAAAGG 220857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434365112480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |