Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq79 154 2e-32 seq73 125 9e-24 >seq79 Length=405269 Score = 154 bits (170), Expect = 2e-32 Identities = 520/798 (65%), Gaps = 14/798 (2%) Strand=Plus/Plus Query 118101 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACT 118158 ||||| ||||| || | ||| |||| || ||| ||| |||||||| || | Sbjct 293011 GACCATAGACCCATGTCCACGAGGTCCTTCAGGAGCCATGG--ATTGACAATTTGGAATT 293068 Query 118159 CACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 118218 ||||||| || || | | || ||||||| ||||| || || |||||||| ||| Sbjct 293069 CACCCGCCAGAACACGGCGCGAGTAAATATTGGAGGTGTAGGGTTCGAAGCACTCGTTGA 293128 Query 118219 TACCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277 |||| ||| | ||||| || ||| || |||||||| || | || | || ||||| Sbjct 293129 -ACCCCAGAATCTGGCTGGTGCTGGCAGTAGGCATGGGCGCAACAAGCAAACTATTACGA 293187 Query 118278 AGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 118337 | || | | ||| || || || | |||||| || || | | | Sbjct 293188 ACTCCATGCTTAGCAATATCTTGTTTCAGCGAGTCCCAATCCCAGAGGTCGGTGGGAGTG 293247 Query 118338 CCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCA 118397 | | |||||||||| | || ||||| |||||||| |||| || || ||| | || Sbjct 293248 ACGTTCCACATATCATATTGAAGGATGCCTTGGGAAACTGGGGAACCTTCATACGTGGAG 293307 Query 118398 TATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTT 118457 |||||||| |||| | |||||||| | ||| | | ||||| || |||||| Sbjct 293308 TATGGGCCGTCAATTTTAGCCAATTCACAAGACGCAGTCAAACCCGCGTGGTAGATTGTT 293367 Query 118458 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA 118517 || ||||| || |||| ||| |||||| |||||| || | || || | | Sbjct 293368 TCGAAAATTTGAATGTTCAACTGCTTAGCCTCGGGGGAATCGAATGGAAGCCGCAAAGCA 293427 Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577 | || |||| || ||||| ||||||||| |||| || ||||| | | ||| | Sbjct 293428 AGGAAAGCATCAGCAAGACCCTGGACACCGCAAGCAATGGGACGATGACGGAAATTG--C 293485 Query 118578 TTCCGAGCGGT--CTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGG 118635 ||| | | ||| || ||||| | |||| |||||| | | | || ||||| Sbjct 293486 TTCGTTTTGCTTCCTCGACCGGATAGTAGTTCCGATCGATGATCTTGTTAAGATTGCGAA 293545 Query 118636 TGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA-CTGCGAGTCTCTTCATTG 118694 ||| |||| || | ||| || ||||| || ||||| | || | | | ||| Sbjct 293546 CGACGACCTGAGTTACTTCGTGGAGCTTGCCGAAATCATACTCTCCCCGGA-CAGCATCC 293604 Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 ||| | |||| | || || |||||||| ||||| || | ||||| | || Sbjct 293605 ACAAAAGTAGGCAAAGCAATAGACGCCAGGTTACAAACTGCAACTTCATC-TGGCGAGCA 293663 Query 118755 -TACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 || || || || || ||||| | ||| || || |||| ||||| | |||||||||||| Sbjct 293664 ATATTCGATGATCTCAGTGCATAGGTTAGAGCTTCTAATTGTGCCGAGGTTCTTTTGATT 293723 Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 ||| |||| ||||| |||||||||||||| |||| | || ||||| ||||| | Sbjct 293724 GCTCTTCTTGTTGCACGCGTCCTTGTAAAGCATAAATGGGTTACCAGTCTCAGTTTGAGC 293783 Query 118874 CTTGAGAATAGCCTTCCA 118891 | |||||||| | ||| Sbjct 293784 TTCAAGAATAGCATACCA 293801 >seq73 Length=4627324 Score = 125 bits (138), Expect = 9e-24 Identities = 301/450 (67%), Gaps = 4/450 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||| ||||||||||| ||||| ||| ||| | ||| || ||||| Sbjct 221304 TAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTGTCCATG 221245 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-TTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || ||||||||||| | ||||| | | || || | |||| |||||| || Sbjct 221244 AAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAAAGCAAC-GAGGAGGCG 221186 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG-GTTAC 129905 ||| | |||| |||||||||| | |||| || || |||||| || | || | || Sbjct 221185 ATCAGCGACGAACTCAATGTATTGGCACATGAGCTTGGCGTTCATTCCAAGAAGCGCGAC 221126 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 ||||| || || | | |||| ||| ||| || |||||||| | ||| | Sbjct 221125 C-GGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGATGATCCTCT 221067 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 | | ||| || || | | ||||| |||||| ||| || || Sbjct 221066 CGACAGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAGACAGGCGAAATCAG 221007 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| | ||||||||||| || || || || || || || || || |||||||| | Sbjct 221006 TGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGCCAGGCATGAGGC 220947 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 |||| |||||||||||||| |||| | || || ||| ||||||||| || || || Sbjct 220946 CCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGATGCCTTCGACGG 220887 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| || | |||||||| ||||||| Sbjct 220886 CAGCGAAGGCGACGAGACGCTGTGCAAAGG 220857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434365112480