Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq79 165 9e-36 seq73 98.7 1e-15 >seq79 Length=405269 Score = 165 bits (182), Expect = 9e-36 Identities = 414/629 (66%), Gaps = 9/629 (1%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| || ||||| ||||||| || || |||| ||||| || || || | || || Sbjct 294535 CCCCCAACACATGATCATGCGTGTTGCTGTCGGAATTCACGGAGACGATGTAGAGAAAGT 294476 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | | || ||||| || ||||| ||| | |||| || || | || ||||| || Sbjct 294475 CATCGAAACATATAACCTCATGTCTCAAAAATTCTTCACGCATGCTTCTCCTACCCTTTT 294416 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||||||||| || ||| || ||| | ||||||||||||| || |||||||| Sbjct 294415 CAATGCTGGTACCCCGCAACCTCAGATGGCTTCGTGCTTCCTTATCGACATGAAGGAGGA 294356 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| | ||||| || | || | | | ||||| || |||||| ||||| Sbjct 294355 CAGTATCGAGGGTATTTACGACACGTTGAAGACTTGTGCCTTGATTTCAAAGACTGCTGG 294296 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | |||| || | | | || | ||| ||| || || || Sbjct 294295 TGGTATTGGCCTCAACATTCACCGCATTCGTGGCACTGGTTCTTACATTGCCGGAACGAA 294236 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | || || |||| ||||| || || || ||| ||| || | ||||| Sbjct 294235 TGGCTCCTCCAACGGAATCGTTCCCATGCTGCGAGTTTTCAACAACACTGCTAGATATGT 294176 Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 | || | || ||| | |||| || |||| | || |||||||| ||||| Sbjct 294175 CGACCAGGGAGGTAACAAGCGGCC---GGGAGCTTTCGCTATTTACCTTGAGCCGTGGCA 294119 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 | | |||||| | || ||| | || | ||| ||||| || | ||||| | ||| Sbjct 294118 CACCGATATCTTCGAATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGAAGTTCGGGC 294059 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 |||||||||||| |||||||||| || ||||| || ||||| | |||||| | | Sbjct 294058 TCGCGATCTCTTCCTGGCTCTCTGGACACCCGATCTGTTTATGAAACGTGTTGAGAAAAA 293999 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 |||| | ||| |||||||||| || | | || || || | | |||| | || || Sbjct 293998 TGGCGAATGGACTCTCTTTTGCCCCAATGAAGCCCCAGGCTTGGCGGATGTCTATGGCGA 293939 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACG 104843 |||||||| || |||||| ||||||| Sbjct 293938 CGAGTTTGAGGCTCTTTACGAGAAGTACG 293910 Score = 136 bits (150), Expect = 5e-27 Identities = 529/813 (65%), Gaps = 20/813 (2%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | |||||||| | ||||||| |||||||||| |||| ||||||||||| ||| Sbjct 293801 TGGTATGCTATTCTTGAAGCTCAAACTGAGACTGGTAACCCATTTATGCTTTACAAGGAC 293742 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || || ||| | ||||| ||||||||||| | || || | || || || || || Sbjct 293741 GCGTGCAACAAGAAGAGCAATCAAAAGAACCTCGGCACAATTAGAAGCTCTAACCTATGC 293682 Query 105008 ACAGAAATCTTGGAAT-TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 105066 || || ||| | |||| || | | |||||| || || |||||||| || || || Sbjct 293681 ACTGAGATCATCGAATATTGCTCGC-CAGATGAAGTTGCAGTTTGTAACCTGGCGTCTAT 293623 Query 105067 CGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATTATGAAAAACTCCACG 105125 ||| | || | | ||||||| | | | || | | ||||| | || ||||||| Sbjct 293622 TGCTTTGCCTACTTTTGTGGATGCTG-TCCGGGGAGAGTATGATTTCGGCAAGCTCCACG 293564 Query 105126 AAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG 105185 |||| || | ||| || || |||| | || ||| | || | || || | Sbjct 293563 AAGTAACTCAGGTCGTCGTTCGCAATCTTAACAAGATCATCGATCGGAACTACTATCCGG 293504 Query 105186 TTGAGACTGC---TCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGG 105242 | ||| || || || | ||| | | || ||||| |||| | |||||| |||| Sbjct 293503 TCGAGGAAGCAAAACG--AAGC-AATTTCCGTCATCGTCCCATTGCTTGCGGTGTCCAGG 293447 Query 105243 GTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAA 105301 |||| || |||| ||| || ||||| || | |||| |||||| ||| || ||| | Sbjct 293446 GTCTTGCTGATGCTTTCCTTGCTTTG-CGGCTTCCATTCGATTCCCCCGAGGCTAAGCAG 293388 Query 105302 ATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCGAGTTCAGAGTT 105360 | || | || || || || || || ||||| | | |||| ||| || || || Sbjct 293387 TTGAACATTCAAATTTTCGAAACAATCTACCACGCGGGT-TTGACTGCGTCTTGTGAATT 293329 Query 105361 GGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCT 105420 ||| | |||| || ||||| || | ||| ||||| |||| ||| ||||| | || Sbjct 293328 GGCTAAAATTGACGGCCCATACTCCACGTATGAAGGTTCCCCAGTTTCCCAAGGCATCCT 293269 Query 105421 TCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGG 105479 ||||| |||||||| |||| || | || | | | || || ||||| | || || Sbjct 293268 TCAATATGATATGT-GGAACGTCACTCCCACCGACCTCTGGGATTGGGACTCGCTGAAAC 293210 Query 105480 AACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCT 105539 || || || | || ||||||| ||| | || | || || ||||| || ||| Sbjct 293209 AAGATATTGCTAAGCATGGAGTTCGTAATAGTTTGCTTGTTGCGCCCATGCCTACTGCCA 293150 Query 105540 CCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATC 105599 |||| || || |||| || || ||||| ||||||||||| | || || || Sbjct 293149 GCACCAGCCAGATTCTGGGGTTCAACGAGTGCTTCGAACCCTACACCTCCAATATTTACT 293090 Query 105600 TGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCGTGGATGACCT 105657 | | | || ||||| || || |||||||| || | ||| || | ||||| Sbjct 293089 CGCGCCGTGTTCTGGCGGGTGAATTCCAAATTGTCAATCCATG--GCTCCTGAAGGACCT 293032 Query 105658 CAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690 | || || ||||| |||||| | | ||||| Sbjct 293031 CGTGGACATGGGTCTATGGTCCGACAACATGAA 292999 >seq73 Length=4627324 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 94793 |||||| || || | ||||| || ||||||||||| |||| | || ||| | Sbjct 220795 AGTTCCCTGCATCCGCAAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTC 220854 Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 ||||||| |||| ||| |||| || || || || || ||||||||| ||| || Sbjct 220855 CACCTTTGCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATC 220914 Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 |||| | || | ||| | ||||| || || |||||||| || || || || || Sbjct 220915 CTTCGCTTCGATCTTCTGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAA 220974 Query 94914 CGAGCTTATCTCTCGTGACGAGGG 94937 ||||||||| |||||||||||||| Sbjct 220975 CGAGCTTATTTCTCGTGACGAGGG 220998 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 95161 AACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTC 95220 ||||||| || ||||||||||||||||| ||||| ||| | ||| ||||| |||||| Sbjct 221222 AACTCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGCAAGACCAACTTC 221281 Query 95221 TTCGAAAAGAGGGTTGGGGACTA 95243 ||||||||| | || || ||||| Sbjct 221282 TTCGAAAAGCGTGTCGGCGACTA 221304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260012597920