Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq50 248 3e-60 seq75 174 5e-38 seq32 132 1e-25 seq49 95.1 4e-14 >seq50 Length=1359123 Score = 248 bits (274), Expect = 3e-60 Identities = 503/742 (68%), Gaps = 15/742 (2%) Strand=Plus/Plus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 ||||| |||||||| ||||| || || || || || | | | | | |||| || | Sbjct 181920 ATAGGTATCGATTTGGGTACCACCTACTCCTGCGTGGGTATCTACCGTGATGACCGCATC 181979 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||| ||||| || || || |||||| | || ||||| || | |||||| || || || Sbjct 181980 GAAATCATTGCCAACGACCAGGGTAACCGGACCACGCCCTCGTTCGTTGCCTTCACAGAC 182039 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| | || || ||| ||||||| ||||||| || || |||| ||||| Sbjct 182040 ACAGAGCGTCTCATCGGCGATGCTGCAAAGAATCAAGTCGCCATGAACCCAAGCAATACA 182099 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACAAATCTACACAA 349435 ||||| || || ||||| || ||||| | ||||| | |||| || || Sbjct 182100 GTTTTCGACGCAAAGCGTCTCATTGGCCGCAAGTTCGCCGATGCTGAGG--TC----CAG 182153 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 |||||| | || ||||| || || | | || | ||| |||| || || | ||| Sbjct 182154 TCTGATATGAAGCATTTCCCCTTCAAGATCATTG-ACAAG--GGTGGCAAGCCTGTCATT 182210 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 || |||| | || || || || | || ||||||||||| || || ||||| Sbjct 182211 CAGATTGAGTTCAAGGGCGAGACGAAGGAGTTCACTCCCGAAGAAATCTCCTCCATGGTC 182270 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | || |||| || | |||||| ||||| | |||| || || | | | || ||| Sbjct 182271 CTCACCAAGATGAGAGAGACTGCTGAGTCATATCTTGGTGGCACCGTCAATAACGCCGTT 182330 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 | ||||| || ||||| || ||||| |||| || || || || |||||||| | Sbjct 182331 GTCACTGTTCCCGCCTACTTCAATGACTCCCAACGCCAAGCTACCAAGGATGCTGGTCTC 182390 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || | ||||| || | || || || || || |||||||| || ||||| || Sbjct 182391 ATTGCTGGTCTCAATGTCCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATTGCTTAC 182450 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || ||||| || | || ||| ||| |||| ||||| || || |||||||| Sbjct 182451 GGCCTTGACAAGAAAGCCGAGGGTGAACGCAATGTTCTCATTTTCGACTTGGGTGGTGGC 182510 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||| || || || || || || | |||||||| || || || || || | ||||| Sbjct 182511 ACTTTCGACGTTTCCCTCCTTACTATCGAAGAGGGTATCTTCGAGGTCAAGTCCACTGCC 182570 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 ||||| || ||||| ||||| || || || ||||| || || ||| || ||||| || Sbjct 182571 GGTGACACTCATCTGGGTGGTGAGGACTTCGATAACCGCCTTGTTAACCACTTTGTAAAC 182630 Query 349916 GAATTTAAGCGTCAAGCTAAAA 349937 || || || || || |||||| Sbjct 182631 GAGTTCAAACGCAAAACTAAAA 182652 >seq75 Length=1151455 Score = 174 bits (192), Expect = 5e-38 Identities = 180/233 (77%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || || || |||||||| ||||| || || Sbjct 638935 CATACCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTC 638994 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | |||||| || || ||||| |||||||| || ||||| || |||||||| || || Sbjct 638995 TGAGAGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGG 639054 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGATGGTT 140685 || || ||||||||||| |||||||| |||||| || || ||||| | ||| || || Sbjct 639055 TGGGATACCTTCTTTATCTTGAATTTT-GCTTTTAACGTTGTCAATGGTATCTGAGCTTT 639113 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | |||||||| |||| || || ||||| || || || || || ||||||||| Sbjct 639114 CGACTTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 167 bits (184), Expect = 7e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 ||||| || ||||| | || | ||| ||||| ||| || ||||| ||||||||||| Sbjct 638711 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAA 638770 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || |||||||| || || || ||||||||||| ||||| |||||||| || ||| Sbjct 638771 AGCGTCCGGCCATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 638830 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || ||||| ||||| || ||||| |||||| |||||||| | || || || ||| Sbjct 638831 ATCCCTTCCTTATCTTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACT 638890 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| | || || ||||| || ||||| || || |||||||| Sbjct 638891 TCAAGTGTGATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 156 bits (172), Expect = 1e-32 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || |||||||| || || || |||||||| || |||||||| Sbjct 639163 CATTCCACCACGGAGGCGAAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATC 639222 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || |||||||| || || |||||||| ||||| | ||||||||| || || Sbjct 639223 GGACAAGGTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGG 639282 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || || |||||||||||||| ||||| ||| ||||| || || || | ||| || | || Sbjct 639283 GGGGATGCCTTCTTTATCCTGGATTTT-GCTCTTTACGTTGTCGATGGTATCCGAAGATT 639341 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 | || || | |||| ||||| || || || ||||| || Sbjct 639342 CCACCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTTGAC 639381 Score = 116 bits (128), Expect = 1e-20 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | ||||| | ||||| |||||||| || || || || || || Sbjct 639478 CATTCCTCCACGGAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTC 639537 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| ||||| || ||||| ||||| || |||||||| ||||| Sbjct 639538 TGACAGGGTACGGCCGTCTTCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGG 639597 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || ||||| || ||||| ||||| | || || || || | |||| || || Sbjct 639598 AGGGATACCTTCCTTGTCCTGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTC 639657 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||| || || || | ||||||||||| Sbjct 639658 AACGTCGAGAGTGATGGTCTTTCCGGT 639684 >seq32 Length=920050 Score = 132 bits (146), Expect = 1e-25 Identities = 206/292 (71%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 378183 ATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGT 378242 ||| ||| ||||||| | ||||| | || || | || || |||||| ||||| Sbjct 392026 ATCGTATTTAACCATGACCTCTTCAAGAGCCTTGACCAGCTTCCGTTGAATATATCCAGT 392085 Query 378243 TTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAA 378302 || | ||| || || || |||||||| | ||| |||||||| |||| ||||||||||| Sbjct 392086 TTCAGCAGTCTTGACAGCTGTATCAATAAGACCCTCACGACCAGCCATAGCATGGAAGAA 392145 Query 378303 TAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGG 378362 ||||||||||| || || |||| | | | ||| |||||| || || | | | || Sbjct 392146 AAATTCAGTAGGGGTGAGACCACGGAGATACGAATTCTCAACGAAGCCGCGAGACTCAGG 392205 Query 378363 CGAATCATCATATTTTGTATAATGAGGTAATGTACGAT-TCTCAAACCCATATGGAATTC 378421 ||||| ||||| || || | || || || ||||||| | | ||||| | |||| || | Sbjct 392206 CGAATAATCATCCTTGGTGAAGTGTGGCAAGGTACGATATTTGAAACCGA-ATGGTATAC 392264 Query 378422 GTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGCAATATT 378473 |||| || ||||| || || |||| ||| | |||||| | |||||| Sbjct 392265 GTTTCCCTTCAACGGATTGCTGGCCAACAACAGCAGTCATTTGGGAAATATT 392316 >seq49 Length=1984306 Score = 95.1 bits (104), Expect = 4e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || ||||| || |||||||||||||| || || || || Sbjct 95356 ACCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGA 95415 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || || ||||| || || ||||| || |||||||| || || || Sbjct 95416 AAGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGG 95475 Query 140630 AATTCCTTCTTTATC 140644 ||||| ||||| || Sbjct 95476 GATTCCCTCTTTGTC 95490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252303266724