Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq79 190 2e-43 seq73 105 7e-18 >seq79 Length=405269 Score = 190 bits (210), Expect = 2e-43 Identities = 402/597 (67%), Gaps = 2/597 (0%) Strand=Plus/Plus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||||||||| | || ||| ||| || | ||||| | || ||| || | Sbjct 293939 TCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTCCATTCGCCA 293998 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | |||||||| | ||| || || || || |||| || ||| |||||| ||||| Sbjct 293999 TTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAGAGATCGCGA 294058 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 || | ||||| | || |||||| ||| || || | || || | ||| |||| | Sbjct 294059 GCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAGATATCGGTG 294118 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||||||||| || || || ||||| | ||| |||||| || ||||||| ||| Sbjct 294119 TGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCCTGGTCGACA 294178 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 || | || ||||||||||||||||| |||||||| ||||| |||| || | ||| ||| Sbjct 294179 TATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAGGAGCCATTC 294238 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCC 79664 || ||| || | ||| | | |||||| | | | || || || || || || Sbjct 294239 GTTCCGGCAATGTAAGAACCAGTGCCACGAATG-CGGTGAATGTTGAGGCCAATACCACC 294297 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 | ||| || || || || ||| | ||| ||||| || |||||||| ||| Sbjct 294298 AGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCGATACTGTC 294357 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 |||||||| ||| |||||||| | |||||| || | ||||| || ||||| Sbjct 294358 CTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCAGCATTGAA 294417 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 ||||| || | || ||||||||||| ||||| ||| || | || || || |||| Sbjct 294418 AAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTTTCGATGAC 294477 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 | | ||||| ||||| || ||||| || || ||||||| | || ||||| Sbjct 294478 TTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGTTGGGG 294534 Score = 159 bits (176), Expect = 4e-34 Identities = 392/591 (66%), Gaps = 4/591 (1%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| || || ||||| || || || ||||| | | |||| ||| ||||| Sbjct 294521 TCATGCGTGTTGCTGTCGGAATTCACGGAGACGATGTAGAGAAAGTCATCGAAACATATA 294462 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| || || ||||||||||| || | || ||||||||||| || ||||| Sbjct 294461 ACCTCATGTCTCAAAAATTCTTCACGCATGCTTCTCCTACCCTTTTCAATGCTGGTACCC 294402 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | || |||||| | || ||||| | | |||||||| ||||| || ||||| | Sbjct 294401 CGCAACCTCAGATGGCTTCGTGCTTCCTTATCGACATGAAGGAGGACAGTATCGAGGGTA 294342 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 | ||||| ||| | ||| || || || || ||| | || ||||| || || Sbjct 294341 TTTACGACACGTTGAAGACTTGTGCCTTGATTTCAAAGACTGCTGGTGGTATTGGCCTCA 294282 Query 19356 AC--TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA 19413 || | || || || | | | |||| | || || ||||| || || | Sbjct 294281 ACATTCACCGCAT-TCGTGGC-ACTGGTTCTTACATTGCCGGAACGAATGGCTCCTCCAA 294224 Query 19414 CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGG 19473 ||| ||||| || ||||| || || ||||||||||| || || || ||| ||||||| || Sbjct 294223 CGGAATCGTTCCCATGCTGCGAGTTTTCAACAACACTGCTAGATATGTCGACCAGGGAGG 294164 Query 19474 CGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGA 19533 ||| || ||| | ||||| || ||||| ||||| |||||| | || || | || Sbjct 294163 TAACAAGCGGCCGGGAGCTTTCGCTATTTACCTTGAGCCGTGGCACACCGATATCTTCGA 294104 Query 19534 TTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCAC 19593 ||| | || || || |||||| || | ||||| | || |||||| |||||| Sbjct 294103 ATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGAAGTTCGGGCTCGCGATCTCTTCCT 294044 Query 19594 GGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653 ||| | |||| || || || || ||| | |||||||| | | |||||| || Sbjct 294043 GGCTCTCTGGACACCCGATCTGTTTATGAAACGTGTTGAGAAAAATGGCGAATGGACTCT 293984 Query 19654 GATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTT 19704 | ||||| | ||| ||| ||| | | || ||||| ||||| | ||| Sbjct 293983 CTTTTGCCCCAATGAAGCCCCAGGCTTGGCGGATGTCTATGGCGACGAGTT 293933 >seq73 Length=4627324 Score = 105 bits (116), Expect = 7e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 |||||||| |||||| | || || || ||| ||||| ||||||||| ||| || ||| Sbjct 220859 TTTGCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTC 220918 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | | || |||||| | || || || ||||||||||| ||||| | || || |||||| Sbjct 220919 GCTTCGATCTTCTGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGAG 220978 Query 60093 CTGATTTCCCGGGACGAGGGC 60113 || ||||| || ||||||||| Sbjct 220979 CTTATTTCTCGTGACGAGGGC 220999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524059491520