Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq79 190 2e-43
seq73 105 7e-18
>seq79
Length=405269
Score = 190 bits (210), Expect = 2e-43
Identities = 402/597 (67%), Gaps = 2/597 (0%)
Strand=Plus/Plus
Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365
|| ||||||||||| | || ||| ||| || | ||||| | || ||| || |
Sbjct 293939 TCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTCCATTCGCCA 293998
Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425
| |||||||| | ||| || || || || |||| || ||| |||||| |||||
Sbjct 293999 TTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAGAGATCGCGA 294058
Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485
|| | ||||| | || |||||| ||| || || | || || | ||| |||| |
Sbjct 294059 GCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAGATATCGGTG 294118
Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545
||||||||||| || || || ||||| | ||| |||||| || ||||||| |||
Sbjct 294119 TGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCCTGGTCGACA 294178
Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605
|| | || ||||||||||||||||| |||||||| ||||| |||| || | ||| |||
Sbjct 294179 TATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAGGAGCCATTC 294238
Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCC 79664
|| ||| || | ||| | | |||||| | | | || || || || || ||
Sbjct 294239 GTTCCGGCAATGTAAGAACCAGTGCCACGAATG-CGGTGAATGTTGAGGCCAATACCACC 294297
Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724
| ||| || || || || ||| | ||| ||||| || |||||||| |||
Sbjct 294298 AGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCGATACTGTC 294357
Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784
|||||||| ||| |||||||| | |||||| || | ||||| || |||||
Sbjct 294358 CTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCAGCATTGAA 294417
Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844
||||| || | || ||||||||||| ||||| ||| || | || || || ||||
Sbjct 294418 AAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTTTCGATGAC 294477
Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901
| | ||||| ||||| || ||||| || || ||||||| | || |||||
Sbjct 294478 TTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGTTGGGG 294534
Score = 159 bits (176), Expect = 4e-34
Identities = 392/591 (66%), Gaps = 4/591 (1%)
Strand=Plus/Minus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175
||||||| || || ||||| || || || ||||| | | |||| ||| |||||
Sbjct 294521 TCATGCGTGTTGCTGTCGGAATTCACGGAGACGATGTAGAGAAAGTCATCGAAACATATA 294462
Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235
|||| ||| || || ||||||||||| || | || ||||||||||| || |||||
Sbjct 294461 ACCTCATGTCTCAAAAATTCTTCACGCATGCTTCTCCTACCCTTTTCAATGCTGGTACCC 294402
Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295
| || |||||| | || ||||| | | |||||||| ||||| || ||||| |
Sbjct 294401 CGCAACCTCAGATGGCTTCGTGCTTCCTTATCGACATGAAGGAGGACAGTATCGAGGGTA 294342
Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355
| ||||| ||| | ||| || || || || ||| | || ||||| || ||
Sbjct 294341 TTTACGACACGTTGAAGACTTGTGCCTTGATTTCAAAGACTGCTGGTGGTATTGGCCTCA 294282
Query 19356 AC--TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA 19413
|| | || || || | | | |||| | || || ||||| || || |
Sbjct 294281 ACATTCACCGCAT-TCGTGGC-ACTGGTTCTTACATTGCCGGAACGAATGGCTCCTCCAA 294224
Query 19414 CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGG 19473
||| ||||| || ||||| || || ||||||||||| || || || ||| ||||||| ||
Sbjct 294223 CGGAATCGTTCCCATGCTGCGAGTTTTCAACAACACTGCTAGATATGTCGACCAGGGAGG 294164
Query 19474 CGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGA 19533
||| || ||| | ||||| || ||||| ||||| |||||| | || || | ||
Sbjct 294163 TAACAAGCGGCCGGGAGCTTTCGCTATTTACCTTGAGCCGTGGCACACCGATATCTTCGA 294104
Query 19534 TTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCAC 19593
||| | || || || |||||| || | ||||| | || |||||| ||||||
Sbjct 294103 ATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGAAGTTCGGGCTCGCGATCTCTTCCT 294044
Query 19594 GGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653
||| | |||| || || || || ||| | |||||||| | | |||||| ||
Sbjct 294043 GGCTCTCTGGACACCCGATCTGTTTATGAAACGTGTTGAGAAAAATGGCGAATGGACTCT 293984
Query 19654 GATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTT 19704
| ||||| | ||| ||| ||| | | || ||||| ||||| | |||
Sbjct 293983 CTTTTGCCCCAATGAAGCCCCAGGCTTGGCGGATGTCTATGGCGACGAGTT 293933
>seq73
Length=4627324
Score = 105 bits (116), Expect = 7e-18
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
|||||||| |||||| | || || || ||| ||||| ||||||||| ||| || |||
Sbjct 220859 TTTGCACAGCGTCTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTC 220918
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| | || |||||| | || || || ||||||||||| ||||| | || || ||||||
Sbjct 220919 GCTTCGATCTTCTGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGAG 220978
Query 60093 CTGATTTCCCGGGACGAGGGC 60113
|| ||||| || |||||||||
Sbjct 220979 CTTATTTCTCGTGACGAGGGC 220999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524059491520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |