Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq79 138 1e-27 seq73 113 5e-20 >seq79 Length=405269 Score = 138 bits (152), Expect = 1e-27 Identities = 389/592 (66%), Gaps = 4/592 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || || | || || ||||| ||||| || | | ||| || || || Sbjct 294521 TCATGCGTGTTGCTGTCGGAATTCACGGAGACGATGTAGA-GAAAGTCATCGAAACATAT 294463 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 || | ||| ||||| | ||| ||||| || | || ||||| ||||| |||||||| Sbjct 294462 AACCTCATGTCTCAAAAATTCTTCACGCATGCTTCTCCTACCCTTTTCAATGCTGGTACC 294403 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 || ||||||||| | |||||||| | | |||||||| ||| ||||| || Sbjct 294402 CCGCAACCTCAGATGGCTTCGTGCTTCCTTATCGACATGAAGGAGGACAGTATCGAGGGT 294343 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| ||| | ||| |||||| || || ||| | |||||||| || || Sbjct 294342 ATTTACGACACGTTGAAGACTTGTGCCTTGATTTCAAAGACTGCTGGTGGTATTGGCCTC 294283 Query 53432 CAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | | | | | |||| | || | || || ||||| ||| | || | Sbjct 294282 AACATTCACCG-CATTCGTGGCACTGGTTCTTACATTGCCGGAACGAATGGCTCCTCCAA 294224 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 |||||||| || ||||| || || ||||||||||| || | || ||| ||||||| || Sbjct 294223 CGGAATCGTTCCCATGCTGCGAGTTTTCAACAACACTGCTAGATATGTCGACCAGGGAGG 294164 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | ||||| ||| | ||||| || ||||| |||||||||||| |||| || | || Sbjct 294163 TAACAAGCGGCCGGGAGCTTTCGCTATTTACCTTGAGCCGTGGCACACCGATATCTTCGA 294104 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 || | || || ||| ||| || || | || || | || || || || || Sbjct 294103 ATTCTTGGACCTTCGTAAGAACCACGGAAAGGAGGAAGTTCGGGCTCGCGATCTCTTCCT 294044 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 ||||| |||| || || || || ||| || || ||||| | | || ||| || Sbjct 294043 GGCTCTCTGGACACCCGATCTGTTTATGAAACGTGTTGAGAAAAATGGCGAATGGACTCT 293984 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 | ||||| || || ||| ||| | || |||||| || || |||||| Sbjct 293983 CTTTTGCCCCAATGAAGCCCCAGGCTTGGCGGATGTCTATGGCGACGAGTTT 293932 >seq73 Length=4627324 Score = 113 bits (124), Expect = 5e-20 Identities = 100/124 (81%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || ||||||| |||||||||||| || || || ||||||||||| ||||| | | | Sbjct 220977 TCGTTAGAAAACGTAAGGCCAGGCATGAGGCCCCGTTTCTTCAACCAGAAGATCGAAGCG 220918 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 ||||| ||||||||||||||||||||||| || |||||||| || || || || || Sbjct 220917 AAGGATCCACTGAAGAAGATGCCTTCGACGGCAGCGAAGGCGACGAGACGCTGTGC-AAA 220859 Query 74910 GGTG 74913 |||| Sbjct 220858 GGTG 220855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215261258400