Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq75 152 6e-32
seq73 116 4e-21
seq103 111 2e-19
seq52 100 3e-16
>seq75
Length=1151455
Score = 152 bits (168), Expect = 6e-32
Identities = 175/231 (76%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || |||||||| || ||||||||||| || || ||
Sbjct 639166 AATGCAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAA--AGC 639109
Query 27465 T--GATAGCATTG-CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
| |||| ||||| ||| || || || |||||||| || || || || || || |||||
Sbjct 639108 TCAGATACCATTGACAACGTTAAAAGC-AAAATTCAAGATAAAGAAGGTATCCCACCAGA 639050
Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
|||||| || || || || || || || || || ||||| | || || || |||||||
Sbjct 639049 CCAGCAACGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTA 638990
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| ||||||| |||||||| || || || ||| | |||||||| |||||
Sbjct 638989 CAATATCCAAAAAGAATCCACACTCCACCTTGTCCTTCGTCTTCGTGGTGG 638939
Score = 141 bits (156), Expect = 1e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487
||||||| ||||| || ||||| || |||||||||||||||| || | | |||
Sbjct 639686 TTACCGGAAAGACCATCACTCTCGACGTTGAGTCAGGTGATACTATCGACGCAGTCAAGT 639627
Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547
| ||||| ||||||||||| || || ||||| |||||||| || || || || ||||| |
Sbjct 639626 CCAAAATCCAGGACAAGGAAGGTATCCCTCCTGACCAGCAACGCCTTATCTTCGCTGGCA 639567
Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607
||||||| || || | |||||||| ||||||| || |||| ||||| || || ||||
Sbjct 639566 AGCAACTGGAAGACGGCCGTACCCTGTCAGACTACAACATCCAGAAGGAGTCTACCCTTC 639507
Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| | || | ||||| || || |||
Sbjct 639506 ACTTGGTTCTCCGTCTCCGTGGAGGA 639481
Score = 138 bits (152), Expect = 1e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
||||| || || || |||||||||||||| | ||||| || || |||| ||| |
Sbjct 639381 GTCAAAACCCTCACTGGCAAGACTATTACCTTGGAGGTGGAATCTTCGGATACCATCGAC 639322
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| ||||| ||||| || || || || || ||||||||||| ||| | ||
Sbjct 639321 AACGTAAAGAGCAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCAGCAACGTTTGATC 639262
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| ||||| ||||| ||||| |||| |||||| | | || ||||| ||||||| |||
Sbjct 639261 TTCGCTGGAAAGCAGCTCGAAGATGGCCGTACCTTGTCCGATTATAACATCCAAAAAGAA 639202
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
||||| || ||||| ||| | || || || ||||||
Sbjct 639201 TCCACCCTCCATCTTGTCCTTCGCCTCCGTGGTGGA 639166
Score = 120 bits (132), Expect = 3e-22
Identities = 167/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || || || || |||||||| ||||| || ||||| || ||| || |
Sbjct 638937 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAAACTATCACACTTGAAGTCGAG--AGCT 638880
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | |||| || | || ||||| || || ||||| || ||||| ||||| |
Sbjct 638879 CCGACACAATTGATAACGTAAAAAGCAAAATCCAAGATAAGGAAGGGATTCCACCAGATC 638820
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||||||||| || |||||||||||||| || || |||| || || || | || ||||
Sbjct 638819 AGCAGCGTCTCATCTTTGCTGGTAAGCAGCTAGAAGATGGCCGGACGCTTTCTGATTATA 638760
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| | || ||||| |||||| ||| | || ||| | | || ||||| ||
Sbjct 638759 ACATTCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGATTGCGGGGTGGCCA 638708
>seq73
Length=4627324
Score = 116 bits (128), Expect = 4e-21
Identities = 140/188 (74%), Gaps = 3/188 (2%)
Strand=Plus/Plus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT-GA--ATCGTGGGTCGTCGTTTGGTCAGCGT 64719
|| |||||||| ||||| ||||||||||| || || | ||| | |||| ||||||
Sbjct 220811 AAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTCCACCTTTGCACAGCGT 220870
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|||| || || || || ||||| || ||||| ||| || ||| ||| || |||
Sbjct 220871 CTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTCGCTTCGATCTTC 220930
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||| | || || |||||||| ||||| || || ||||||| |||||||| || |||||
Sbjct 220931 TGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGAGCTTATTTCTCGT 220990
Query 64840 GACGAGGG 64847
||||||||
Sbjct 220991 GACGAGGG 220998
>seq103
Length=249856
Score = 111 bits (122), Expect = 2e-19
Identities = 136/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || |||||||| ||||| | || | ||
Sbjct 43378 CTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACTAT 43319
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| |||||| |||||||||||||| || || || ||||||||||| |
Sbjct 43318 CGACAATGTCAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCCGACCAGCAGCGATT 43259
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAATGTCCAAA 27592
|| || || || ||||| || ||||| | || || | |||| || ||||| | || |
Sbjct 43258 GATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGC-GATTATAACATTCAGA 43200
Query 27593 AGG 27595
|||
Sbjct 43199 AGG 43197
>seq52
Length=747234
Score = 100 bits (110), Expect = 3e-16
Identities = 201/293 (69%), Gaps = 4/293 (1%)
Strand=Plus/Minus
Query 31248 GCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGG 31307
|||| | || || || || | || || || || || ||||||| | || || || ||
Sbjct 583876 GCACCACTGTACTCTCATCCTGACTGAAGGAGATTCCGCAAAGGGATTAGCCATGGCCGG 583817
Query 31308 CTTGAG-TGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTA 31366
| ||| | |||| |||| || ||||| || || || |||||||| |||| || ||
Sbjct 583816 -TCGAGCTATTGTTGGGCCTGATCTCTTCGGTGTATTCCCTCTCCGAGGAAAGCTGCTTA 583758
Query 31367 ACGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAA 31426
|||| || |||||||||||| | ||| | | | |||| ||| | ||| | ||||
Sbjct 583757 ACGTCCGGGACGCCTCCGTTGATCAGATATCCAAAAATGCAGAAATCCAGAACATCAAAA 583698
Query 31427 AGATCCTCGGGCTTCAGCATGGCAAGGTATATAAT-TCACTGAGAGAATTGCGGTACGGT 31485
| | || ||||| ||||| |||| |||| | ||| || | | || |||||
Sbjct 583697 ACTTTCTTGGGCTACAGCACAAGAAGGAGTATACTGACACAAAG-GGCCTCCGCTACGGG 583639
Query 31486 CGCCTCATGATTATGACCGACGCAGATCTCGACGGCAGTCACATCAAGGGTCT 31538
| |||||||| ||||| || ||||| |||||| ||||| || ||||| ||
Sbjct 583638 CATCTCATGATCATGACTGATCAAGATCACGACGGAAGTCATATTAAGGGCCT 583586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309630080960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |