Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq75 152 6e-32 seq73 116 4e-21 seq103 111 2e-19 seq52 100 3e-16 >seq75 Length=1151455 Score = 152 bits (168), Expect = 6e-32 Identities = 175/231 (76%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || |||||||| || ||||||||||| || || || Sbjct 639166 AATGCAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAA--AGC 639109 Query 27465 T--GATAGCATTG-CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 | |||| ||||| ||| || || || |||||||| || || || || || || ||||| Sbjct 639108 TCAGATACCATTGACAACGTTAAAAGC-AAAATTCAAGATAAAGAAGGTATCCCACCAGA 639050 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 |||||| || || || || || || || || || ||||| | || || || ||||||| Sbjct 639049 CCAGCAACGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTA 638990 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||||||| |||||||| || || || ||| | |||||||| ||||| Sbjct 638989 CAATATCCAAAAAGAATCCACACTCCACCTTGTCCTTCGTCTTCGTGGTGG 638939 Score = 141 bits (156), Expect = 1e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 ||||||| ||||| || ||||| || |||||||||||||||| || | | ||| Sbjct 639686 TTACCGGAAAGACCATCACTCTCGACGTTGAGTCAGGTGATACTATCGACGCAGTCAAGT 639627 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 | ||||| ||||||||||| || || ||||| |||||||| || || || || ||||| | Sbjct 639626 CCAAAATCCAGGACAAGGAAGGTATCCCTCCTGACCAGCAACGCCTTATCTTCGCTGGCA 639567 Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607 ||||||| || || | |||||||| ||||||| || |||| ||||| || || |||| Sbjct 639566 AGCAACTGGAAGACGGCCGTACCCTGTCAGACTACAACATCCAGAAGGAGTCTACCCTTC 639507 Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | | || | ||||| || || ||| Sbjct 639506 ACTTGGTTCTCCGTCTCCGTGGAGGA 639481 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 ||||| || || || |||||||||||||| | ||||| || || |||| ||| | Sbjct 639381 GTCAAAACCCTCACTGGCAAGACTATTACCTTGGAGGTGGAATCTTCGGATACCATCGAC 639322 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| ||||| ||||| || || || || || ||||||||||| ||| | || Sbjct 639321 AACGTAAAGAGCAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCAGCAACGTTTGATC 639262 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| ||||| ||||| |||| |||||| | | || ||||| ||||||| ||| Sbjct 639261 TTCGCTGGAAAGCAGCTCGAAGATGGCCGTACCTTGTCCGATTATAACATCCAAAAAGAA 639202 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||| || ||||| ||| | || || || |||||| Sbjct 639201 TCCACCCTCCATCTTGTCCTTCGCCTCCGTGGTGGA 639166 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || |||||||| ||||| || ||||| || ||| || | Sbjct 638937 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAAACTATCACACTTGAAGTCGAG--AGCT 638880 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| || | || ||||| || || ||||| || ||||| ||||| | Sbjct 638879 CCGACACAATTGATAACGTAAAAAGCAAAATCCAAGATAAGGAAGGGATTCCACCAGATC 638820 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || |||||||||||||| || || |||| || || || | || |||| Sbjct 638819 AGCAGCGTCTCATCTTTGCTGGTAAGCAGCTAGAAGATGGCCGGACGCTTTCTGATTATA 638760 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | | || ||||| |||||| ||| | || ||| | | || ||||| || Sbjct 638759 ACATTCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGATTGCGGGGTGGCCA 638708 >seq73 Length=4627324 Score = 116 bits (128), Expect = 4e-21 Identities = 140/188 (74%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT-GA--ATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || |||||||| ||||| ||||||||||| || || | ||| | |||| |||||| Sbjct 220811 AAGAAGGCTGATTGGGCTATCCGGTGGATCGAAGATAAGGAGTCCACCTTTGCACAGCGT 220870 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 |||| || || || || ||||| || ||||| ||| || ||| ||| || ||| Sbjct 220871 CTCGTCGCCTTCGCTGCCGTCGAAGGCATCTTCTTCAGTGGATCCTTCGCTTCGATCTTC 220930 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||| | || || |||||||| ||||| || || ||||||| |||||||| || ||||| Sbjct 220931 TGGTTGAAGAAACGGGGCCTCATGCCTGGCCTTACGTTTTCTAACGAGCTTATTTCTCGT 220990 Query 64840 GACGAGGG 64847 |||||||| Sbjct 220991 GACGAGGG 220998 >seq103 Length=249856 Score = 111 bits (122), Expect = 2e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || |||||||| ||||| | || | || Sbjct 43378 CTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACTAT 43319 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| |||||| |||||||||||||| || || || ||||||||||| | Sbjct 43318 CGACAATGTCAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCCGACCAGCAGCGATT 43259 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAATGTCCAAA 27592 || || || || ||||| || ||||| | || || | |||| || ||||| | || | Sbjct 43258 GATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGC-GATTATAACATTCAGA 43200 Query 27593 AGG 27595 ||| Sbjct 43199 AGG 43197 >seq52 Length=747234 Score = 100 bits (110), Expect = 3e-16 Identities = 201/293 (69%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 31248 GCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGG 31307 |||| | || || || || | || || || || || ||||||| | || || || || Sbjct 583876 GCACCACTGTACTCTCATCCTGACTGAAGGAGATTCCGCAAAGGGATTAGCCATGGCCGG 583817 Query 31308 CTTGAG-TGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTA 31366 | ||| | |||| |||| || ||||| || || || |||||||| |||| || || Sbjct 583816 -TCGAGCTATTGTTGGGCCTGATCTCTTCGGTGTATTCCCTCTCCGAGGAAAGCTGCTTA 583758 Query 31367 ACGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAA 31426 |||| || |||||||||||| | ||| | | | |||| ||| | ||| | |||| Sbjct 583757 ACGTCCGGGACGCCTCCGTTGATCAGATATCCAAAAATGCAGAAATCCAGAACATCAAAA 583698 Query 31427 AGATCCTCGGGCTTCAGCATGGCAAGGTATATAAT-TCACTGAGAGAATTGCGGTACGGT 31485 | | || ||||| ||||| |||| |||| | ||| || | | || ||||| Sbjct 583697 ACTTTCTTGGGCTACAGCACAAGAAGGAGTATACTGACACAAAG-GGCCTCCGCTACGGG 583639 Query 31486 CGCCTCATGATTATGACCGACGCAGATCTCGACGGCAGTCACATCAAGGGTCT 31538 | |||||||| ||||| || ||||| |||||| ||||| || ||||| || Sbjct 583638 CATCTCATGATCATGACTGATCAAGATCACGACGGAAGTCATATTAAGGGCCT 583586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309630080960