Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq75 150 2e-31 seq49 91.5 1e-13 >seq75 Length=1151455 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||||||||||||||| |||| || |||||||| || ||| Sbjct 638937 ATGCAGATCTTCGTGAAAACTCTGACCGGCAAAACTATCACACTTGAAGTCGAGAGCTCC 638878 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||| ||||| || ||||| || ||||| ||||| Sbjct 638877 GACACAATTGATAACGTAAAAAGCAAAATCCAAGATAAGGAAGGGATTCCACCAGATCAG 638818 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || | ||||| | ||| |||| ||||| ||| Sbjct 638817 CAGCGTCTCATCTTTGCTGGTAAGCAGCTAGAAGATGGCCGGACGCTTTCTGATTATAAC 638758 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| |||||| || | |||||||| ||| | |||||||||||| Sbjct 638757 ATTCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGATTGCGGGGTGGC 638710 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | |||||||||||||| ||| || Sbjct 639165 ATGCAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAAAGCTCA 639106 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||||||||| |||||||| || ||||| || || Sbjct 639105 GATACCATTGACAACGTTAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAG 639046 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | |||||| ||||| | || ||| | || | || || ||||| Sbjct 639045 CAACGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTACAAT 638986 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || | || | || | ||| | || ||||| || Sbjct 638985 ATCCAAAAAGAATCCACACTCCACCTTGTCCTTCGTCTTCGTGGTGGTAT 638936 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || ||||| || || |||||| ||||||| | || |||||| | || || | || || Sbjct 639381 GTCAAAACCCTCACTGGCAAGACTATTACCTTGGAGGTGGAATCTTCGGATACCATCGAC 639322 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | || || ||||| || || ||||||||||| || || || || || ||||| || Sbjct 639321 AACGTAAAGAGCAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCAGCAACGTTTGATC 639262 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||| || || || | ||||| | ||| | |||||||| ||||| ||||| || Sbjct 639261 TTCGCTGGAAAGCAGCTCGAAGATGGCCGTACCTTGTCCGATTATAACATCCAAAAAGAA 639202 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||| | ||| | || | || | || ||||| || Sbjct 639201 TCCACCCTCCATCTTGTCCTTCGCCTCCGTGGTGGAAT 639164 >seq49 Length=1984306 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 ||||||||| || || || ||||| || || || | || | |||||||||||| | || Sbjct 95491 AGACAAAGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAACAGCTCGA 95432 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 || | ||| ||||||| |||||||||||||| ||||||||| | || | || | Sbjct 95431 GGATGGCCGTACCCTTTCCGACTACAACATTCAAAAAGAGTCGACCCTTCACCTCGTCCT 95372 Query 27200 GCGTTTGCGGGGTGG 27214 |||| |||| ||||| Sbjct 95371 GCGTCTGCGTGGTGG 95357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917812860160