Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq75 150 4e-31 seq103 111 4e-19 seq49 111 4e-19 >seq75 Length=1151455 Score = 150 bits (166), Expect = 4e-31 Identities = 167/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||||||||| || ||||| ||||||||||| || || || | || || Sbjct 638944 ACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGT 639003 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||| || || |||||||| || ||||| ||||| || || | || Sbjct 639004 TCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACC 639063 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| || || || || || ||| ||||| || ||||| || |||||||| || || || Sbjct 639064 TTCTTTATCTTGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAG 639123 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| ||||| || || || || ||||| || || | ||||||| Sbjct 639124 AGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || | |||||| || ||||| || |||||||| || || | || Sbjct 639484 TCCACGGAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGACAG 639543 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | || |||||||| |||||||| ||||||||||||||||| ||||||||||| | Sbjct 639544 GGTACGGCCGTCTTCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGGAT 639603 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||||||||||||||| || || || ||||| || ||| ||||| || Sbjct 639604 ACCTTCCTTGTCCTGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTCAACGTC 639663 Query 211070 GAGAGTGATCGTCTTTCCCGT 211090 ||||||||| |||||||| || Sbjct 639664 GAGAGTGATGGTCTTTCCGGT 639684 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || || ||||| |||||||||||||||||||| | | ||| | |||||| Sbjct 639182 AGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCT 639241 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | ||||| ||||| || || | ||||| || ||| Sbjct 639242 TCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCC 639301 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || ||||| |||||||| || || ||| ||||| | || || ||| Sbjct 639302 TGGATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTC 639361 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||| || || || Sbjct 639362 TTGCCAGTGAGGGTTTTGAC 639381 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||| ||| || || ||||||||||| | ||| |||| |||||||| |||||| Sbjct 638735 TGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATCTTCTAGCTGC 638794 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| || || || || || || |||| |||||||| || ||||| || Sbjct 638795 TTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATCTTGGATTTTG 638854 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| ||||| || || ||||| ||||| || || || || ||||| || || || || Sbjct 638855 CTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAGTTTTGCCGGTC 638914 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || | |||||| Sbjct 638915 AGAGTTTTCACGAAGATCTGCAT 638937 >seq103 Length=249856 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || ||||||||||| ||| |||| || || || ||||||||||| |||||||| Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 43258 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || ||||| || || | || |||||||||||||| || || || || ||| Sbjct 43259 AATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTCG 43318 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| | || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 43319 ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAA 43377 >seq49 Length=1984306 Score = 111 bits (122), Expect = 4e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||||||||| ||||| || || | |||||| | ||||| Sbjct 95372 AGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAAAGGGTACGGCCATCC 95431 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||| ||||| |||||||| |||||||| ||||| || || | ||| || ||||| Sbjct 95432 TCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGGATTCCCTCTTTGTC 95490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150396023420